Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01162 ATGGCGGACAATAGATATGTGCCCTCCATTCTCTCCCGAAATTCCAATAATGCATTCTTAGAGAACCAACCAATAAGATTTGCAACACTATTGGGAAGTTCCCCCGTCACGGTGGGAACTAATATAGGCTACATGGTCTCTAATCCCACCACTATCACCACCACCACTAACAACACAAATGCAATGTTGATGATGCCACCACCACCACCAACATTAACACTGACACAACCCTTATGCGGTAGGTCTGTTGATCTACCTCAAGATCCAAGGGAGGATCATACCGGATCCTCCTCCAAGAAAACCAGAGGTAGAACCAAGGGGGCTAAGAATAAGCCTAAACCAGTATCCACCGTTACTAATGAAAATACCGACATCCTAATGGAACCATTTCTTATCGACATCCCTAGTGGAAAAGATGTTATGGAGACTCTCATCAACTTGGCTCGTTGTCAGCAAGCTGGAATAACCGTGTTGAGTGGTTTTGGCCTTATTTCTGAGGCTACACTTCTTGAACCGATGCCTTGTGCCCGTTCTTTCTGCATCAAAGGATTGTTCCAGATGACATCTCTCTCTGGAACTTACATTAATGCTAATGGTGTTAACGTTCCTCCTCGGTTCATGAGAACCAACCCAACATATTCCTCTTTCTCCATTATCCTCTCCGGCGCTAATGGACAAGTGTTTGGTGGAATAGTTGGGGGAAATGTTAAGGCTGCTGGTGTTGTTTCGATTACGGCCACTCTCTTCAAGAAACCATCATTTCATAGGATGGGTGTCATCAATGGAAGTGTTCGTGAAATAACGGAGGACGACCCAATATATGATAATGGTTTTATCATGAACTTTGATCAGGGATCTTGTCAACCCATCACTCGTACTAGCTAG 885 0.4429 MADNRYVPSILSRNSNNAFLENQPIRFATLLGSSPVTVGTNIGYMVSNPTTITTTTNNTNAMLMMPPPPPTLTLTQPLCGRSVDLPQDPREDHTGSSSKKTRGRTKGAKNKPKPVSTVTNENTDILMEPFLIDIPSGKDVMETLINLARCQQAGITVLSGFGLISEATLLEPMPCARSFCIKGLFQMTSLSGTYINANGVNVPPRFMRTNPTYSSFSIILSGANGQVFGGIVGGNVKAAGVVSITATLFKKPSFHRMGVINGSVREITEDDPIYDNGFIMNFDQGSCQPITRTS 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01162 294 CDD DUF296 129 249 IPR005175 -
Mepo4g01162 294 MobiDBLite consensus disorder prediction 65 118 - -
Mepo4g01162 294 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 90 258 IPR014476 GO:0003680
Mepo4g01162 294 MobiDBLite consensus disorder prediction 85 99 - -
Mepo4g01162 294 SUPERFAMILY AF0104/ALDC/Ptd012-like 127 257 - -
Mepo4g01162 294 Pfam Plants and Prokaryotes Conserved (PCC) domain 129 250 IPR005175 -
Mepo4g01162 294 ProSiteProfiles PPC domain profile profile. 124 270 IPR005175 -
Mepo4g01162 294 Gene3D - 129 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01162 Mepo-Chr4 15180887 15181771 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01162 99 257 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 37.888 1.03e-29 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01162 - - mtr:25482579 284.263