Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01153 ATGATTGAAGTGGGAATGGATGCCACCATCATCTCGGGTAGCATCGGTTGTCATGGAAATAAGTTGAATGCACGCACATACGACTCGGCTACATTTGATGTGAGTGGTTCAGGGTTCATTGCACAAGACATATCTATCAAGAACACTGCTGGTCCTGAAAATGGCCAAGCAGTAGCACTAAAATCTGACTCCGACCTTTCTGTATTTTATAAAGTTGGGATATTTGGTTACCAAGATACTTTATTGGCCATAACAAATCACCAGTTTTATAAAGAGTGTAAAATTAGCTGCACGTTCGATTTTGTTTTTGGCCACGCCACTGCAGTTTTTCAAAACTGCCTAATATTGGCCACAAAAGGGACGTCGGGACAAAAGAACACAATCACGGCTCAAGGTGGATTAAATGGAACGCCAACTGGTTTCGTTTTTCAGTTCTGCAACATATCAGCAGATTCTGACCTTGTACCTTCGATTAAATCAACCTCTACATTTCTCGGCAGACCATGGCATCCAAACTCGAGAGTAGTTTTCATGCAATCAAATATTGGTGATGTCTTAAGTCCCGAAGGATGGTTAGAGTGGGAAGGGTCGTCTGAAAATTTAGATACACTATTTTATGCAGAATATAAGAATTCAGGACCAGGAGCAAATCTAAGAAAAAGAGTGAAGTGGTCAGGATACCATGTGCTGATCATTCTATGCAGGCGAGTAACTTCACGGTGGCCAACTTCATTTCAGGTGATCAATGGTTACCTTTAA 759 0.4137 MIEVGMDATIISGSIGCHGNKLNARTYDSATFDVSGSGFIAQDISIKNTAGPENGQAVALKSDSDLSVFYKVGIFGYQDTLLAITNHQFYKECKISCTFDFVFGHATAVFQNCLILATKGTSGQKNTITAQGGLNGTPTGFVFQFCNISADSDLVPSIKSTSTFLGRPWHPNSRVVFMQSNIGDVLSPEGWLEWEGSSENLDTLFYAEYKNSGPGANLRKRVKWSGYHVLIILCRRVTSRWPTSFQVINGYL 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01153 252 PANTHER PECTINESTERASE 1 230 - -
Mepo4g01153 252 SUPERFAMILY Pectin lyase-like 5 230 IPR011050 -
Mepo4g01153 252 Pfam Pectinesterase 4 230 IPR000070 GO:0030599|GO:0042545
Mepo4g01153 252 Gene3D - 1 239 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01153 Mepo-Chr4 15057335 15058679 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01153 1 230 Carbohydrate Esterase AT4G33220 56.710 5.39e-86 259