Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01152 ATGCAACACATGATTAATCAATGGAACCCTCCGCCTCCGCCGCCGCTAAACACCTCCAAAACACCATCCCTTACGGTGGCTGAATCACCTCCGCTGCCCATCACCAACACTGTCAGAGAAAGGAGTGAGGTGGAACCAAGTGTTGTTGCTAGAAAAGTTCAGAAGGCTGACCGTGAGAAAATCAGGAGGGATCGCTTGAATGATCATTTTCATCAATTGGGAAACGTAATAGATCCTGATAGACCACGGAATGACAAGGCAACCATCATCACAGAGACAATCCAAGTGCTAAAGGACATAACATCTGAAGTTGATAGACTGAAAACAGAGCATAAATCACTTTCTGAAGAGTCACATGAACTAATACAAGAAAAGAATGAACTCCGAGAAGAGAAAGCGTCTTTAAAATCCGATATAGAAAATCTTAATTCTCAGTATCAGCAGAGAGTCAGAGTCATGCCGCCATGGACTGCAATTGACCATTCTGTTGTCATGAGCAGCCCTTATACGTACCCCGTTCCTATGCCAATGCCAATGCCAATGCCAATCCCTCCTGGTCCGGTTTCCATTCACCCACCACCTATGCAACCTTTTCCTTACTTCGGAAACCAAAATCCTGGTCATATTCCAAGTCTATCCTCAATGTATATTCCATTCTCGGCTCCAGCTATCCCTCCAATAGAGATGCCATCAGCTCAGTATCCTTCTACATCCCACATGTTTAGTCGAAAAGAGTCTCGAAGCAAGTCACCAGGTCATAGAAGAAGACCTAGTGATGCAGAAAGATGTAGTGTGTCTCCAGATGTGGCAACAGAGCTTGAGCTTAAGATGCCTGGATCATCAACACAACAGGTATATTATAAACAATTTATATATATCATAAAAATCCAAACTTGTTTCAGTGCTAAAACGGACTGA 918 0.4346 MQHMINQWNPPPPPPLNTSKTPSLTVAESPPLPITNTVRERSEVEPSVVARKVQKADREKIRRDRLNDHFHQLGNVIDPDRPRNDKATIITETIQVLKDITSEVDRLKTEHKSLSEESHELIQEKNELREEKASLKSDIENLNSQYQQRVRVMPPWTAIDHSVVMSSPYTYPVPMPMPMPMPIPPGPVSIHPPPMQPFPYFGNQNPGHIPSLSSMYIPFSAPAIPPIEMPSAQYPSTSHMFSRKESRSKSPGHRRRPSDAERCSVSPDVATELELKMPGSSTQQVYYKQFIYIIKIQTCFSAKTD 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01152 305 MobiDBLite consensus disorder prediction 234 265 - -
Mepo4g01152 305 SMART finulus 56 106 IPR011598 GO:0046983
Mepo4g01152 305 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 51 120 IPR036638 GO:0046983
Mepo4g01152 305 Pfam Helix-loop-helix DNA-binding domain 51 99 IPR011598 GO:0046983
Mepo4g01152 305 Coils Coil 97 145 - -
Mepo4g01152 305 CDD bHLH_AtILR3_like 55 129 - -
Mepo4g01152 305 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 50 100 IPR011598 GO:0046983
Mepo4g01152 305 PANTHER TRANSCRIPTION FACTOR BHLH121 37 285 IPR044579 GO:0003700|GO:0006879
Mepo4g01152 305 MobiDBLite consensus disorder prediction 20 42 - -
Mepo4g01152 305 MobiDBLite consensus disorder prediction 1 63 - -
Mepo4g01152 305 MobiDBLite consensus disorder prediction 242 262 - -
Mepo4g01152 305 Gene3D - 49 126 IPR036638 GO:0046983
Mepo4g01152 305 MobiDBLite consensus disorder prediction 44 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01152 Mepo-Chr4 14996000 14999130 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01152 48 284 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G19860 52.941 2.77e-70 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo4g01152 HLH 3e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01152 - - adu:107487484 319.316