Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01108 ATGAGCAAATCCAACAATTTCTTTCATAATCTTATAAAGCCCTTCAAATTTGGTTCTACCAGAGAGGGAAATAGTGAAGACGATATACAGAACATAGCTACACAAGAGCAGAGAACATTTTCCTACGTAACATTGGTTGCTGCTACTAACAACTTTCATGTTCATAACAAACTTGGTCAGGGAGGCTTTGGCCCTGTCTACAAGGGTAAATTGAATGATGGGAGAGAGATAGCAGTGAAGAAGTTATCACATGGTTCAAACCAAGGGAAGACACAGTTTGTTGCGGAGGCAAAGTTGCTGACTCGTGTGCAGCACCGTAATGTGGTGAATTTGTATGGTTATTGTATCCATGGTAGAGAGAAGCTTCTTGTGTATGAGTATGTCCCTCTTGAGAGCCTTGACAAGTTCCTATTCAGATCAAACAAGAAACAAGAGCTAGATTGGAAACGTAGATTTGACATAATCAATGGAGTGGCAAGAGGCTTACTTTATCTTCATGAAGACTCTCACATTTGTATAATCCATCGTGACATAAAAGCAGCCAACATTTTACTTGATGAAAAATGGGTCCCTAAGATTGCTGACTTTGGCTTGGCTCGTCTCTTTCCAGAAGATGAAACTCATGTCAATACACGTGTGGCTGGAACACATGGATACATGGCCCCGGAGTACTTAATGCATGGACATCTATCTGTGAAGGCAGATGTGTATAGCTATGGAGTTTTGGTGTTGGAGTTGATCACTGGTCATCGAAACTCCTCCTCGGATTCAGCCTTCAATGGAGACAATCTCCTTAATTGGGCATACAAACTATACAAGAAAGGGAAGTGGTTAGAAATGGTTGATCCCACAGTGGCATCATCTGTGACAACCACCGAGCAAGTGGAAGTGTGCATTCGAGTGAGTCTGCTGTGCACGCAAGGAGATCCACAACTTCGTCCAACGATGGGGCGTGTTGTGTTGATGTTATCAAAGAAGCCACCAAGTCACATGGAAGAACCAACGAGACCAGGTGTGCCCGGTTCTAGATACAGAAGAGCATTGCCTCGTAGTCATACACCTTTCACTACTGATGATGAGAATTCGTCTGCTTCACACATTGATTCCAGCAATTGCGACACTATTACTACTACCACCACCTCCACCAATTCCACTTCTGCAACAAGAACAGCCTCTGCTACTGCACAACTAGACTCTCGAGGGAAACGTCCAATGTTTCCTTGA 1224 0.4346 MSKSNNFFHNLIKPFKFGSTREGNSEDDIQNIATQEQRTFSYVTLVAATNNFHVHNKLGQGGFGPVYKGKLNDGREIAVKKLSHGSNQGKTQFVAEAKLLTRVQHRNVVNLYGYCIHGREKLLVYEYVPLESLDKFLFRSNKKQELDWKRRFDIINGVARGLLYLHEDSHICIIHRDIKAANILLDEKWVPKIADFGLARLFPEDETHVNTRVAGTHGYMAPEYLMHGHLSVKADVYSYGVLVLELITGHRNSSSDSAFNGDNLLNWAYKLYKKGKWLEMVDPTVASSVTTTEQVEVCIRVSLLCTQGDPQLRPTMGRVVLMLSKKPPSHMEEPTRPGVPGSRYRRALPRSHTPFTTDDENSSASHIDSSNCDTITTTTTSTNSTSATRTASATAQLDSRGKRPMFP 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01108 407 CDD STKc_IRAK 58 325 - -
Mepo4g01108 407 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Mepo4g01108 407 SUPERFAMILY Protein kinase-like (PK-like) 36 346 IPR011009 -
Mepo4g01108 407 Pfam Protein tyrosine and serine/threonine kinase 53 320 IPR001245 GO:0004672|GO:0006468
Mepo4g01108 407 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 25 379 - -
Mepo4g01108 407 MobiDBLite consensus disorder prediction 326 407 - -
Mepo4g01108 407 Gene3D Transferase(Phosphotransferase) domain 1 129 335 - -
Mepo4g01108 407 SMART serkin_6 52 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g01108 407 FunFam Cysteine-rich receptor-like protein kinase 2 128 331 - -
Mepo4g01108 407 FunFam Cysteine-rich receptor-like protein kinase 10 16 127 - -
Mepo4g01108 407 MobiDBLite consensus disorder prediction 354 397 - -
Mepo4g01108 407 Gene3D Phosphorylase Kinase; domain 1 16 127 - -
Mepo4g01108 407 ProSiteProfiles Protein kinase domain profile. 52 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01108 Mepo-Chr4 14645171 14650368 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01108 32 338 Receptor kinase-like Gene Family AT4G11530 51.603 4.96e-108 331
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo4g01108 PK_Tyr_Ser-Thr 3.7e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01108 - - mtr:11421623 771.541