Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01107 ATGTTTGCACCATGCAGAATCCCCCCAATCCTAACACCCTCTTCTTCCGCCAACCCTAACACTTCTCGTTTCGCGCCTTTAACAACAACAACAACAACCAGAGTCGCTCTCTCTTCCAAATCACCCTCCAAACTACCTCTCTTTGCCAGGTTCACTCGTAGTTGCAGCAGTAGTAGCAATAGCGGTCATTCTGATCACTCCGGTGGTCCCGCCTCCCCCGAAATAGATGTAGTAGAAGGTGAATCATCTTCTGACTTTGGTGATAGCTATGTGGCCTTGTTTGTTCGTATGCTAGGCCTAGATCATGATCCACTTGATAGAGAACAAGCTATAATTACTCTTTGGCAATATTCACTTGGTGGGAAGAAGTGTATTGACAATATAATGCAATTTCCTGGCTGTATTAATCTTGTTGTCAACCTCCTTAGAGCAGAATCTAGTTCGGCTTGTGAAGCAGCTGCAGGCCTTCTGCGGTCACTATCTTCAATCGACCAATATAGGAATTCTGTAGCAGATAGTGGAGCTATAGAAGAGATAAATAGATTGCTGACACAATCTTCCTTGACTCCTGAGGTAAAGGTGCAGAGTTTGAACACACTTTTCAATTTATCTTTTGATGAGAAGCTCCGAGTAAAAATTGCAAAGAGCGATCTTCTTTTGTTAGTTATGAAGTACCTTGATGATGAGAATATGAAAGTGAAGGAAGCTGCAGGGGGCATTTTGGCAAATTTAGCATTGAGCCATGCTAACCATGACATCATGGTTGAAGCAGGTGTTATTCCAAAATTGGCGAAGTTCTTACAATATGACTACGAAGCATCTAAAGTCACTAGAAAGGAAGCAAGGAATGCATTGCTAGAACTTGTGAAGGACGATTATTACAGAATTCTTGTTATTGAGGAAGGTTTAGTTCCTGTGCCATTAATAGGTGCTGCAGCCTATAAGTCATACAACCCACGTTTATACGAGGCACCTGCATTTCCAGATGGCACAGAAATCGAAAGGACTTATGACAAACCTTCTAGATTTGGCGCATCAGAAGTACTTATTGGATTGAATGTTGATAATAATGCTAACGTAGATGAAGCAAAAGTCAATGCAATCATTGGACAGACACAACAACAATTCCTTGTTCGTGTTGGTGCTATTGAAATGGAAGAAACAGCAACTCGTTCTGAATGTTCAGATGATCAGCCGCGTCTGACACTCTTACATTGGATCGGCGGTGTTGCTCGTTTAGCGCTGATACTGGAACTAGAAGATAAGTCAGCAATAGTAAGAGCTGCAGAGTCAATTGCTAGTGCATGTATAAATGAACATATGCGTATTGCATTCAAGGAGGCTGGTGCAGTTAGGCATTTAGTACGGCTTTTGTCTTGGAATGATAATGCAGTCCAGCTGGCAGCGACGCAAGCTTTGGAAAAGCTGTCTGCTAGCAATGTTGTTTGCCGAGTAATTGAAACTGAGGGTGGTTTAGCTCCTTTAGTTAGTATTTTAAAATGCTCAGACGTAGCTGGAGCTATTGCGGAAAAGTCCTTGAACGTGCTTGCTCAGATATTAGATCCCAATAAAGAGATGCAGTTAAAGTTTTATGATGGACCAGTTAATGGAACTAAGAAGGCATTTAATGGAGCCGATGATGGATCAAAGGAATTAAGTAGTACCGAGCAAGCCGTATCGAAAACAAACCCAAGGAGCGATATACTGAACTCAGTTTTCACTGCACGCCTTGTGGATATTTTGAAGTCCTCTTTACCCAGTTTACAAGAAAAAGCCGCATCTGTTATTGAGTTTGTGGCATTGATTGATCCAACACTGAGTCCGATTATTTCTGTGGATATTGAAAATGGTCTCAATTCTACTTTTCAGCAAAATCTCTTGAAAATTTCGGCAGAGACAGAATCTGACGTGGAAGATCAGTTTTCAGCAGCATATGCTATTGAACTTGAAGAGGCCGGTCTTGCAATATCTGCAGCATCGCGCTTATTGACAAGACTACTTGACTCTAAGCAGTTTTGCGAAAAAATAAATCTCTCCCATTTCATTGACACGCTCCGCAAAATTCTCAAGTCCCATATTCCCCTCCGCAGCAAAGATTGGGTGGCTGCTTGCCTAGTTAAACTAAGTTCTCTATCTGGTTACGACACAAATTCTAATCCGATCAACGTAGAAGTTACACTTTATGACACAATTCCAAGACTTGTAGAACAGATCAAAACTTCATTCTCTTTAGAAGCACAGGAAAAGGCTGCTGTAGAACTTAGTAGAATAGTATCTGAAGGGGTGGTAGATTCCACAGGAGCTATTATTTCGGAAGGGGCTGTGTATTCTTTGGTGAAGCTGATTGAAGAAGGTAGTGAAAGAGGTATTGAAGTAAGCTTGAAAATACTGTATAATCTTAGTATGGACAGTGACAACCATTCAGCACTTCTAGCTGCTGGGGCAGTCCCAGCCTTAAGAAGAATTGTTCTGTCAGAAAAACCACAGTGGCAAAGGGCACTTCATTTGCTCAGGAGTTTGGAAACATGA 2529 0.4168 MFAPCRIPPILTPSSSANPNTSRFAPLTTTTTTRVALSSKSPSKLPLFARFTRSCSSSSNSGHSDHSGGPASPEIDVVEGESSSDFGDSYVALFVRMLGLDHDPLDREQAIITLWQYSLGGKKCIDNIMQFPGCINLVVNLLRAESSSACEAAAGLLRSLSSIDQYRNSVADSGAIEEINRLLTQSSLTPEVKVQSLNTLFNLSFDEKLRVKIAKSDLLLLVMKYLDDENMKVKEAAGGILANLALSHANHDIMVEAGVIPKLAKFLQYDYEASKVTRKEARNALLELVKDDYYRILVIEEGLVPVPLIGAAAYKSYNPRLYEAPAFPDGTEIERTYDKPSRFGASEVLIGLNVDNNANVDEAKVNAIIGQTQQQFLVRVGAIEMEETATRSECSDDQPRLTLLHWIGGVARLALILELEDKSAIVRAAESIASACINEHMRIAFKEAGAVRHLVRLLSWNDNAVQLAATQALEKLSASNVVCRVIETEGGLAPLVSILKCSDVAGAIAEKSLNVLAQILDPNKEMQLKFYDGPVNGTKKAFNGADDGSKELSSTEQAVSKTNPRSDILNSVFTARLVDILKSSLPSLQEKAASVIEFVALIDPTLSPIISVDIENGLNSTFQQNLLKISAETESDVEDQFSAAYAIELEEAGLAISAASRLLTRLLDSKQFCEKINLSHFIDTLRKILKSHIPLRSKDWVAACLVKLSSLSGYDTNSNPINVEVTLYDTIPRLVEQIKTSFSLEAQEKAAVELSRIVSEGVVDSTGAIISEGAVYSLVKLIEEGSERGIEVSLKILYNLSMDSDNHSALLAAGAVPALRRIVLSEKPQWQRALHLLRSLET 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01107 842 MobiDBLite consensus disorder prediction 11 31 - -
Mepo4g01107 842 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 449 491 IPR000225 GO:0005515
Mepo4g01107 842 Gene3D - 364 612 IPR011989 -
Mepo4g01107 842 SMART arm_5 121 162 IPR000225 GO:0005515
Mepo4g01107 842 SMART arm_5 803 839 IPR000225 GO:0005515
Mepo4g01107 842 SMART arm_5 206 246 IPR000225 GO:0005515
Mepo4g01107 842 SMART arm_5 438 478 IPR000225 GO:0005515
Mepo4g01107 842 SMART arm_5 762 802 IPR000225 GO:0005515
Mepo4g01107 842 SMART arm_5 717 759 IPR000225 GO:0005515
Mepo4g01107 842 SMART arm_5 247 290 IPR000225 GO:0005515
Mepo4g01107 842 SMART arm_5 163 205 IPR000225 GO:0005515
Mepo4g01107 842 MobiDBLite consensus disorder prediction 58 82 - -
Mepo4g01107 842 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 773 815 IPR000225 GO:0005515
Mepo4g01107 842 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 174 207 IPR000225 GO:0005515
Mepo4g01107 842 MobiDBLite consensus disorder prediction 1 31 - -
Mepo4g01107 842 Gene3D - 85 323 IPR011989 -
Mepo4g01107 842 SUPERFAMILY ARM repeat 658 832 IPR016024 -
Mepo4g01107 842 Gene3D - 625 841 IPR011989 -
Mepo4g01107 842 SUPERFAMILY ARM repeat 91 521 IPR016024 -
Mepo4g01107 842 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 29 842 - -
Mepo4g01107 842 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 133 175 IPR000225 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01107 122 306 U-box Gene Family AT2G23140 29.947 1.41e-09 59.7