Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01101 ATGGATAATAATGTTCTTGGTCTTCTAAAACTTCGTATTAAAAGAGGTATTAATCTTGCAATTCGTGATTCTAATTCCAGCGACCCTTATGTTGTTGTCAACATTGGTCATGAACAGAAGTTGAAGACTCGTGTCGTGAAAAACAACTGCAACCCTGAGTGGAATGAAGAATTAACCCTTTCAATAAGGGATGTAAGAGTTCCAATACGTCTGACAGTATTTGACAAAGACACTTTCTCCGTAGATGACAAAATGGGTGATGCAGAGATAGACTTGAAACCATATGCTCAATGTGTACAAATGAAGTTGGATACTCTTCCGAATGGTTGTGCAATCAAGAGGGTTCAAGCAAATAGGACTAACTGCCTTGCTGAAGAGAGCAGTTGTATTTGGAAAAATGGAAAAGTCATCCAAGAAATGATTCTAAGATTGAGAAATGTTGAGAGTGGAGAATTGGTTGTGGAAATTGAGTGGGTGGATGTTCCAGGTTGCAAAGGTCTATTAGGGGCAAAAATATAA 519 0.3815 MDNNVLGLLKLRIKRGINLAIRDSNSSDPYVVVNIGHEQKLKTRVVKNNCNPEWNEELTLSIRDVRVPIRLTVFDKDTFSVDDKMGDAEIDLKPYAQCVQMKLDTLPNGCAIKRVQANRTNCLAEESSCIWKNGKVIQEMILRLRNVESGELVVEIEWVDVPGCKGLLGAKI 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01101 172 ProSiteProfiles C2 domain profile. 1 106 IPR000008 -
Mepo4g01101 172 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 4 165 IPR044562 -
Mepo4g01101 172 Gene3D C2 domain 3 164 IPR035892 -
Mepo4g01101 172 CDD C2_ArfGAP 6 150 - -
Mepo4g01101 172 Pfam C2 domain 8 94 IPR000008 -
Mepo4g01101 172 SMART C2_3c 8 104 IPR000008 -
Mepo4g01101 172 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 5 159 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01101 Mepo-Chr4 14571969 14574040 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01101 40 167 C2H2 Transcription Factor Family AT1G70790 70.769 3.74e-64 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01101 - - gmx:100788395 284.263