Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01047 ATGTCGCCCTCCAGTGAACCCTATTTCATCCACATTGAAGATTCATTTGACACCATCCCTCAATTTTTTTATCCACATGAATGTTTCCTCATTAAACGTCACTACTTCCACTCCCCTTCATTCAATCATTATTCCTTCATCATTCCTCGTAACATCTTATGTGATTACGACGATTTTGAATCCGTGGATCCGGATAGTTTGTCCAATACCTTGTTACGCAACACTTTCTCGGTGCTTCCTGATGAAGTGTTGGAAGACACTCTATTTCTTATCGGTGACAATGCTAGGGATATGAGCAGAGTCAACTTTGAAGGAGATAGAATATTGAAGATGGATGTATTGGTTGGCCAAAAGGGATCTAGTACAATCCTGGAGAAGGTCAAATTGGAAGATATTGCTACTAGTTCTTCAATGAAAGAATGTGCAATTTGTTTGGAGGAATTTTTCTGTGGATCAGAAGAACAACACATTGTTCGTACCAAGTGCATGCATGTTTTCCATGAGCAATGTGTTGCTAAGTGGATTATAAACTGTGGCATTACCAATCCACAATATCCCTGCCCAATGTGTCGTTCCCAAATTCAATGA 588 0.3963 MSPSSEPYFIHIEDSFDTIPQFFYPHECFLIKRHYFHSPSFNHYSFIIPRNILCDYDDFESVDPDSLSNTLLRNTFSVLPDEVLEDTLFLIGDNARDMSRVNFEGDRILKMDVLVGQKGSSTILEKVKLEDIATSSSMKECAICLEEFFCGSEEQHIVRTKCMHVFHEQCVAKWIINCGITNPQYPCPMCRSQIQ 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01047 195 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 118 195 IPR013083 -
Mepo4g01047 195 SUPERFAMILY RING/U-box 140 194 - -
Mepo4g01047 195 ProSiteProfiles Zinc finger RING-type profile. 141 191 IPR001841 -
Mepo4g01047 195 PANTHER RING ZINC FINGER PROTEIN-RELATED 118 194 - -
Mepo4g01047 195 SMART ring_2 141 190 IPR001841 -
Mepo4g01047 195 Pfam Ring finger domain 139 191 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01047 Mepo-Chr4 13885907 13886494 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01047 123 194 C3H Transcription Factor Family AT4G12190 31.507 1.12e-08 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01047 - K16282 mtr:112418131 248.825