Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01046 ATGACATCCTCTAACAAATCTTATTTCTACATTAGATTTTACCATTACCAATCCACTTCATTCATATGCTATTACTTCTTGATTCCTGGTAGCATCTTGAGCAAATATGATGTATCTGAATGCTTGAATCCTAATAGTTATACTAATATGTTTTTACTCAACACTTTCTCCGTCGTGCCTATTCCTTCCGAAGTGTTGAAACATGCTCTACTTCGCATGGGCGAGTACGCGAGAAATATGATTACAGTCAACATTGAAGGACGTCGTATATTGGAGATGAATGTTACTGCTCATGATGTAAGTAAGGTTATGAATTCGTTGGAGAAGATCAAAGTGGAGGACATTGCAGTTACCGCTTGTTCAATGGAACAATGCTCAATTTGTTTGAAGGAGTTTTACAATGAAACAGAAGTACCAAACATTGTTCGTACCAAGTGCATGCATGTTTTCCATCAACACTGTGTTGCTCGATGGCTTAAGCAGTGTTGCATTAGCAATCGATTATATTCCTGCCCATTGTGTCGTTCCGAAATTCAATGGTCATATTTTCAAATCAGAATTTGA 564 0.3723 MTSSNKSYFYIRFYHYQSTSFICYYFLIPGSILSKYDVSECLNPNSYTNMFLLNTFSVVPIPSEVLKHALLRMGEYARNMITVNIEGRRILEMNVTAHDVSKVMNSLEKIKVEDIAVTACSMEQCSICLKEFYNETEVPNIVRTKCMHVFHQHCVARWLKQCCISNRLYSCPLCRSEIQWSYFQIRI 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01046 187 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 94 178 - -
Mepo4g01046 187 SMART ring_2 125 174 IPR001841 -
Mepo4g01046 187 Pfam Ring finger domain 124 175 IPR001841 -
Mepo4g01046 187 ProSiteProfiles Zinc finger RING-type profile. 125 175 IPR001841 -
Mepo4g01046 187 SUPERFAMILY RING/U-box 124 180 - -
Mepo4g01046 187 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 88 180 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01046 Mepo-Chr4 13868762 13869325 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01046 107 178 C3H Transcription Factor Family AT4G12190 38.889 1.35e-11 56.2