Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01044 ATGACGACTGAATTGGAGCGAAAGAATATGTTCGACATTGAAGCGGGATCCATGTTGGTGAATGAACTGAGAGAAACATTTGGTTCTGGAAAAACACGAAATTATGAATGGAAAGTGTCACAGTTGAACCAGCTTTTTAAGCTTTTAAACTTTCATGAACAAGAAATCATTGATGCTCTTCGTAATGATATCGATAAACCCCCTCTCGAAACTGTCGCCTATGAGATTGGTATGTTGAAAAACTCATGTAAAACTGCACTCAAAGAATTGAAGCATTGGATGGCTCCAGAAAAGGTCAAAACATCAATCACAACTTTTCCTTCTTCAGCTGAAATAGTATCTGAACCATTTGGAGTTGTGTTGGTCATCTCTGCATGGAACTATCCATTTTTGTTATCACTTGATCCAGTCATTGGAGCTATTGCAGCTGGTAATGCTGTGGTCTTAAAACCATCAGAAATTGCTCCAGCCACATCATCATTGCTGGCAAAACTGTTAGGGGAATACATGGATACCTCATCTATAAGAGTTGTTGAGGGGGCAGTTGATGAAACATCTGCATTACTGCAACAAAAGTGGGACAAAATTTTCTACACAGGTAATGGAAGAGTGGCACGCATTGTGATGGCTGCTGCTGCTAAGCACCTTACACCAGTTGTGCTGGAGCTTGGAGGAAAATCACCAGTTGTTGTTGATTCAAATATCAACTTACAGGTAGCAGCTAGGAGAATAATCGCAGGAAAGTGGGGTTGCAACAATGGACAAGCTTGCATTTCTCCAGATTATATCATAACAACAAAAGACTATGCTCCTAAGCTGGTGGATGCTCTAAAGACTGAATTAGAGCAATTTTATGGAAAGAATCCATTGGAATCAAAAGATTTGTCGCGTATTGTAAACTCAAACCACTTCGATCGCTTGGTAAAGCTTTTGGATGATGATAAAGTTTCTGGTAAGATTGTTCATGGAGGTGAAAAGGATAAAAGCAAATTGAGGATTAGCCCTACTGTTCTACTGGATGTCCCGCGTGATTCTCTGATAATGAGCGAAGAGATATTTGGTCCTTTACTTCCCATCGTCACGGTCGATAAACTAGATGAAAGCTTCGATGTGATAAATTCAGGATCGAAGCCTCTTGCTGCATATATATTTACAAACAACAAGAAGCTCAAGGAGCATTTTGTCAAGACTGTTTCTGCTGGTGGTTTGGTCATCAATGACACTACTTTACACCTTGCAGTTCATACTTTGCCTTTTGGAGGAGTAGGTGAGAGTGGAGTGGGTGCATACCATGGAAAATTCTCATTTGATGCATTTAGCCACAAAAAAGCAGTTCTTTATCGCAGTTTTTTTGGTGATGCTTCTATTAGGTATCCACCATACACCAATACAAATATGAGATTGATGAAGGCACTCATGGGTGGTGGCTTACTTGCTATAATTCGTGCCTTATTTGGAAAATCCTAG 1467 0.4001 MTTELERKNMFDIEAGSMLVNELRETFGSGKTRNYEWKVSQLNQLFKLLNFHEQEIIDALRNDIDKPPLETVAYEIGMLKNSCKTALKELKHWMAPEKVKTSITTFPSSAEIVSEPFGVVLVISAWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLGEYMDTSSIRVVEGAVDETSALLQQKWDKIFYTGNGRVARIVMAAAAKHLTPVVLELGGKSPVVVDSNINLQVAARRIIAGKWGCNNGQACISPDYIITTKDYAPKLVDALKTELEQFYGKNPLESKDLSRIVNSNHFDRLVKLLDDDKVSGKIVHGGEKDKSKLRISPTVLLDVPRDSLIMSEEIFGPLLPIVTVDKLDESFDVINSGSKPLAAYIFTNNKKLKEHFVKTVSAGGLVINDTTLHLAVHTLPFGGVGESGVGAYHGKFSFDAFSHKKAVLYRSFFGDASIRYPPYTNTNMRLMKALMGGGLLAIIRALFGKS 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01044 488 FunFam Aldehyde dehydrogenase 24 228 - -
Mepo4g01044 488 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 24 443 IPR016162 GO:0016491
Mepo4g01044 488 Pfam Aldehyde dehydrogenase family 37 445 IPR015590 GO:0016491
Mepo4g01044 488 PIRSF ALDH 3 480 IPR012394 GO:0006081
Mepo4g01044 488 CDD ALDH_F3FHI 17 447 - -
Mepo4g01044 488 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 225 425 IPR016163 GO:0016620
Mepo4g01044 488 SUPERFAMILY ALDH-like 20 461 IPR016161 GO:0016491
Mepo4g01044 488 FunFam Aldehyde dehydrogenase 225 425 - -
Mepo4g01044 488 PANTHER ALDEHYDE DEHYDROGENASE 17 475 IPR012394 GO:0006081
Mepo4g01044 488 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 221 228 IPR029510 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01044 Mepo-Chr4 13845183 13851290 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01044 76 486 Aldehyde Dehydrogenase Gene Family AT1G44170 74.696 0.0 665
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01044 K00128 - gmx:100816594 806.979