Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01040 ATGGAATTCATTGAGGAAACAGGAATGGACGACCCAGAATCTACAATGGCAACAGTTGCTAATTTTTTGGAGCAACTGCATGCCAACATGTCATCACCACTTGAGAAAGAACTTATTACAGCACGATTATTAAGTGTTGCCAAGAAAAGAAAGGATGCTAGAGCACTTATTGGTTCTCATGCCCAAGCCATGCCCTTGTTCATAAACATTCTCAGAAATGGAACCCCGCTTGCAAAAGTTAATGTAGCTTCCACTCTGAGTATCCTGTGCAAAGATGAAGACTTGAGGTTAAAAGTACTTCTTGGTGGTTGTATCCCACCATTACTGTCAGTTTTAAAATATGAATCCACTGATGCTAGGAAGGCAGCAGCTGAAGCAATATATGAAGTTTCCTCTGGTGGTCTTTCAGTTGATCATGTTGGTATGAAAATTTTTGTTACAGAAGGTGTAGTTCCAACGTTATGGAATCAACTAAATCCACATAACAAAGAAGACAAAGTTGTGGAAGGTTTTATTACTGGAGCATTAAGAAATCTATGTGGGGACAAAGATGACTATTGGAAAGCAACATTAGAAGCTGGAGGTGTGGATATCATTGTGGGTCTCTTGTATTCAGATAATTCTGTTTCTCAGTCAAATGCAGCTTCTCTGTTGGCACGTCTAATGCTGGCTTTTAGTGATAGCATCCCCAAAGTAATAGACTCTGGAGCAGTCAAAGCTTTACTTCAACTTGTTGGTCAGGAAAATGATATTTCTGTACGAGCCAGTGCTGCCGATGCCCTAGAGGCCCTTTCTTCAAAGTCTACCAAGGCTAAAAAGGCTATTGTTGATGCAGATGGGGTTCCAATCCTTATTGGAGCTATTGTTGCTCCTTCTACAGAGTGTATGCGAGGTGATGGCGGTCGGGCCTTGCAAGAGCATGCAACTCGCGCTTTAGCCAACATCTATGGGGGCATGTCTTCTTTAATACTATATCTTGGAGAACTTTCCCATTCTCCTCGCCTTGCTGCCCCAGTTGGCGATATAATTGGTGCTCTTGCTTATACACTCATGGTCTTTGTGGAAAATCTTGATATTGATGGGGAACATTTTGATGCAACTCAGATAGAGGATAATCTTGTAACTCTTTTAAAACCAGGAGACAACAAGCTAATTCAAGAACGTGTCCTTGAGGCTATGGCTAGTCTTTATGGAAACGTCTATCTCTCAAAGCGACTTGTTCAAGCAGATTCAAAGAAGGTTCTCGTTGGTCTTATAACAATGGCTGCTCCTGATGTGCAAGAGTATCTGATACTTTCATTGACAAGCTTGTGTTGTGAAAAGATTGGAATATGGGAGGCCATAAAAAAGCGAGAAGGTATCCAGTTGCTGATTTCATTGGTGGGATTAGCCAGTGAGCAGCATCAGGAGTACTCAGTTCAATTGTTAGCGATCTTAACTCACCAGGTTGACGATAGCAAATGGGCAATCACTGCTGCTGGAGGGATTCCACCGTTGGTGCAGTTGTTAGAGACAGGATCTCAAAAAGCAAAAGAGGAAGCAGCTAATGTTCTCTGGAGTTTGTGCTGTCACAGTGAAGATATTCGTGCCTGTGTTGAAAGTGCTGGAGCCGTACCAGCATTTTTGTGGCTTCTCAAGAGTGGTGGACCAAAAGGACAAGAAGCTTCTGCAATGGCACTCACAAAGCTTGTCCGAGTAGCTGATTCTGCCACTATTAATCAGCTATTAGCATTGCTACTAGGGGATTCTACAAGCTCGAAGGCACATATAATTCGGGTTTTGGGTCACGTGCTTTCTATTGCTTCACAGAAGGATCTCCTTCAGAAGGGATCTGCAGCCAATAAAGGACTGAGATCTCTTGTTCAAGTTCTCAAATCATCAAATGTGGAAAACCAAGAATATGCAGCTTCAGTCCTTGCTGATTTATTTCTCACTAGACAAGACATGTGTGATAGTCTAGCAACTGATGAGATTGTGCTTCCTTGCCTGCAGCTTTTAACTAGCAAAACTCAAGGTGTTGCCACTCAGTCTGCTCGAGCCTTATGTGCTCTGTCTCGTCCAAACAAGAGCAAGGCTGCAAATAGGATGTCTTATATTGTAGAGGGTGATGTTGAGCCACTAATCAAACTAGCTAAAACATCCTCTGTTGATGCTGCTGAAACTGCTGTTGCTGCATTGGCCAATCTTCTCTTTGATCCATCTATTGCCGCTGAAGCTCTAGCCGGAGATGTTGTTTCAGCTTTAACAAGAGTTCTGGAAGAAGGATCCTTGGAAGGTAAACAAAATGCTTCATGTGCACTTCATCAATTACTGAAGCATTTTCCAGTAGGCGACGTTCTCAAGGGGAATGCTCAATGCCGTTTTGCTGTACTTGCCCTTGTTGATTCATTAAGAGCTATGGATATGGATGGACCTGATGCAGCAGATACTTTAGGAGCAATTGCGCTGCTAATTAGGACTAAACAGGGTGTTGACTTCACTTACCATCCGTGGTTAGCTCTGGCTGAAATACCATCAAACATAGAACTTCTCATTTACTGTTTGGCTGAGGGGCCTCCCCTTGTGCAGGACAAAGCAATTGAAATTCTGTCCAGGCTTTGTGGAGATCAGCCAGCTGTTCTTGGTGAATTGTTACTTGCTAGTTCAAGATCCATTGTGTCATTGGCTGATAGAATTATAAACTCCTCCAGTTCAGAAGTGAAAGTTGGTGGAGCTTCCTTACTAATTTGTGCTGCAAAGGAGAAGAAAGAGATTTCATTGGATTCACTTGACTCTTCTGGTTATCTAAAACAACTGATATATTCTTTAGTTGATATGGTGAAGCAAAGTTGTTTCTGTTCTTCATTAGATATTGAAGTATTCACCGCTAAAGGTTTTATGGAGAGGAATGCATTTCAAGAAGCTGACGTGTTTGATATTCCCGATCCGGCTGTTGTCTTGGGAGGTACTGTTGCCCTGTGGTTGCTCTCAATTATTACTTCTTTCCATTCAAAGAGTAAGCTCACAGTTATGGAAGCTGGTGGACTTGAAGCTCTCTGTGACAAACTTGCAAGACATACTTCAAATCCACAGGCAGAATATGAGGATACCGAAGGAATATGGATCAGTGCCTTGTTCTTGGCCATTTTATTTAAAGATGCAAACATCACTCTATCACCTGCTACAATGAACATTATTCCTTCTATTGCTCTTCTGCTAAGATCTGAAGAAGTAATTGATAAATATTTTGCTGCCCAGGCTTTGGCTAGTCTTGTTTGTAATGGTAATAGGGGGATAAATCTTGCCATTGCAAATTCTGGTGCTGTTGCTGGTTTGATAACTATTATTGGGCATATTGAGTCAGATATGCCAAATCTCGTGACATTATCAGAAGAATTTTCCTTGGTGCAAAACCCTGATCAAGTTGTTTTGGATCACCTTTTTGAAATTGTAGATGTAAGATTGGGGTCTACTGCACGGAAATCTATACCCCTCTTAGTGGACCTCTTAAGACCAATACCTGAAAGGCCTAATGCTCCACCAGTTGCTGTTAGACTCTTGATATCCATCGCAGATGGAAGTGATGCAAATAAATCACTTCTGGCAGAAGCTGGAGCTCTGGAAGCTTTGAACAAATACCTCTCCTTGAGCCCTCAAGATTCAACTGAGACTGCCATTTCAGAGTTACTGAGAATTTTATTTTTTAACTCTGACCTCATTAAACATGAAGCATCAACAAGTTCATTGAACCAACTCATAGCTGTTTTGCGTCTCGGATCGAGAAATGCTAGATACAGTGCAGCAAGAGCACTCCATGAACTTTTTGATGCCGACTATATCAGAGATTCAGAATTAGCTAAACAGGCCATTCAGCCATTGGTTGACATGCTTAACACAACATCAGGGAGTGAGCAGGAAGCTGCTCTCCTGGCCTTGATCAAGTTAACATCAGGAGATTCGTCAAAAGCATGTGTTTTTACTGATGTGGAAGGGAATCCACTTGAAAGTTTATACAAAATACTGTCTTCTGCTTCTACTTTGGAACTGAAGAGCCATGCTGCACATCTCTGCTATGCTCTTTTTGGTAATAGCAAGATCAGAGCAAACCCAGTTGCCTCAGAATGCATAAAACCCCTTATATCACTAATGCAGTCTGGTTATGAGACAGCAATAGAATATGGGGTTTGTGCTTTTGATAGACTGTTGGAAGATGAACAGCAGGTGGAGCTTGCAGCAGCCTATAATGTTGTGGATCTCCTTGTCGGCTTGGTTTCTGGTGAAAACTACCAGCTTATTGAGGCCACTATATCTGTTCTAATTAAATTGGGTAAAGACAGGACTCCTAGCAAACATGACATGGTCAAAGCTGGCATTATTGATAATTGTCTCAAGCTATTTCAATCAGCACCTAGCTCCTTATGCTCCACAATAGCCGAGCTTTTTCGCATTTTAACTAATAGTAGTGCAATTGCTAGAAGTTCAGATGCTGCAGAAATTGTAGAACCCCTTTTCAATGTTTTGCTCCGTCGGGATTTCAATATATGGGGACAGCATAGTGCCTTACAAGCACTTGTGAATATATTGGAGAAACCGCAAAGTCTTGCATCCTTAAAGCTTACTCCTAGCCAAGTCATTGAACCCTTGATTTCTTTTCTGGAATCCCCATCCCAGGATATTCAGCAGCTTGGCACGGAATTGTTATCTCATCTTCTTGCACAGGAACACTTTCAGCAAGATATTACAACAAAGAATGCAGTTGTGCCCCTTGTACGGCTTGCAGGAATTGGAATTTTAAATTTACAGCAAACAGCAATAAAAGCATTGGAAAAAATATCCACAAGCTGGCCAAAGGCCGTTGCTGATGCGGGAGGTATTTTCGAGCTTGCAAAAGTTATTATTCAAGATGATCCTCAGCCACCACATGCACTCTGGGAATCAGCTGCTTTAGTTCTCTCTAATGTGTTACGTTCCAATGCTGATTACTATTTTAAAGTTCCTGTGGTGGTTCTTGTAAAACTCTTGCACTCAACACTTGATAGTACAATTAGCCTTGCGCTAAATGCTTTAGCAGTTTATGAAAGAAGCTATGGTTCAAGTGCTGAAGAGATGATGGAAGCTGGAGCTATGGATGCTCTGTTGCACCTTATAAGATCTCATCAATGTGAAGAAGCATCTGCTGGATTACTTGAAACTTTATTTAACAATGTCAGAGTACGGGAGATGAAGGTATCTAAGTATGCTATAGCGCCTTTATCCCAATATCTGTTGGATCCACAAACCAGATCACAGTCTGGCAAGCTTCTGGCTGCTTTAGCTCTGGGAAATCTTTCCCAGCATGAACGACATGCTAGAGCTAGTGACTCTGTATCTGCATGTCGTGCATTGATAAGTATACTTGAAGATCAGCCAACTGAAGAAATGACAATGGTGGCTATATGCGCATTACAAAACTTTGTCATGAACAGCAGGACAAATAGACGTGCTGTTGCAGAAGCTGGGGGAATACTTGTGATTCAGGAATTGCTGCTGTTTCCAAATACAGAAGTTGCTGGACAAGCAGCTCTATTAATCAAATTTTTGTTTTCTACTCACACATTACTAGAATATGTGTCAAATGAGCTGATCAGATCTTTGACAGCTGCACTCGAAAGGGAGTTGTGGTCAACTGCCACAATCAATGAGGAAGTTTTGAAAACACTCCATGTGATATTCATAAACTTTCCTAAGCTCCACACATCTGAAGCAGCAACCCTGTGCATTCCTCATTTGGTAGGGGCACTTAAATCTGGGAGTGAAGTTGCTCAAGACTCTGTACTTGACACCTTTTTCTTGCTAAAACAATCTTGGTCTACCATGCCAATAGATATAGCAAAATCTCAAGCCATGACTGCTGCTGAGGCCATCCCCATATTACAAATGCTCATGAAAACCTGCCCACCAAGTTTCCATGAGAGGGCAGATACTCTTCTTCACTGCTTACCTGGTTGTTTGACTGTCACCATTAAACGTGGAAACAACCTCAAGCAAACTATGGGAAGCACTAATGCATTTTGCCAGTTGACAATAGGCAATGGCCCTACAAAACAAACCAAGGTAGTGAACCACAGTACTTCTCCGGAATGGAAAGAAGGATTCACATGGGCATTTGATGTACCTCCCAAGGGGCAAAAGCTCTATATCGTATGCAAAAGCAAGAATACTTTTGGAAAGACAACTCTTGGAAAAGTCACCATCCAAATTGATAAAATTGTGACAGATGGGGTTTATAGTGGACAATTCAGTCTTAGTCATGACGGCAGCAAAGATGGTTCTTCCCGAACACTTGAAATTGAGATTATATGGTCCAACAGAATTTCTAATGATGACATTTGA 6351 0.4171 MEFIEETGMDDPESTMATVANFLEQLHANMSSPLEKELITARLLSVAKKRKDARALIGSHAQAMPLFINILRNGTPLAKVNVASTLSILCKDEDLRLKVLLGGCIPPLLSVLKYESTDARKAAAEAIYEVSSGGLSVDHVGMKIFVTEGVVPTLWNQLNPHNKEDKVVEGFITGALRNLCGDKDDYWKATLEAGGVDIIVGLLYSDNSVSQSNAASLLARLMLAFSDSIPKVIDSGAVKALLQLVGQENDISVRASAADALEALSSKSTKAKKAIVDADGVPILIGAIVAPSTECMRGDGGRALQEHATRALANIYGGMSSLILYLGELSHSPRLAAPVGDIIGALAYTLMVFVENLDIDGEHFDATQIEDNLVTLLKPGDNKLIQERVLEAMASLYGNVYLSKRLVQADSKKVLVGLITMAAPDVQEYLILSLTSLCCEKIGIWEAIKKREGIQLLISLVGLASEQHQEYSVQLLAILTHQVDDSKWAITAAGGIPPLVQLLETGSQKAKEEAANVLWSLCCHSEDIRACVESAGAVPAFLWLLKSGGPKGQEASAMALTKLVRVADSATINQLLALLLGDSTSSKAHIIRVLGHVLSIASQKDLLQKGSAANKGLRSLVQVLKSSNVENQEYAASVLADLFLTRQDMCDSLATDEIVLPCLQLLTSKTQGVATQSARALCALSRPNKSKAANRMSYIVEGDVEPLIKLAKTSSVDAAETAVAALANLLFDPSIAAEALAGDVVSALTRVLEEGSLEGKQNASCALHQLLKHFPVGDVLKGNAQCRFAVLALVDSLRAMDMDGPDAADTLGAIALLIRTKQGVDFTYHPWLALAEIPSNIELLIYCLAEGPPLVQDKAIEILSRLCGDQPAVLGELLLASSRSIVSLADRIINSSSSEVKVGGASLLICAAKEKKEISLDSLDSSGYLKQLIYSLVDMVKQSCFCSSLDIEVFTAKGFMERNAFQEADVFDIPDPAVVLGGTVALWLLSIITSFHSKSKLTVMEAGGLEALCDKLARHTSNPQAEYEDTEGIWISALFLAILFKDANITLSPATMNIIPSIALLLRSEEVIDKYFAAQALASLVCNGNRGINLAIANSGAVAGLITIIGHIESDMPNLVTLSEEFSLVQNPDQVVLDHLFEIVDVRLGSTARKSIPLLVDLLRPIPERPNAPPVAVRLLISIADGSDANKSLLAEAGALEALNKYLSLSPQDSTETAISELLRILFFNSDLIKHEASTSSLNQLIAVLRLGSRNARYSAARALHELFDADYIRDSELAKQAIQPLVDMLNTTSGSEQEAALLALIKLTSGDSSKACVFTDVEGNPLESLYKILSSASTLELKSHAAHLCYALFGNSKIRANPVASECIKPLISLMQSGYETAIEYGVCAFDRLLEDEQQVELAAAYNVVDLLVGLVSGENYQLIEATISVLIKLGKDRTPSKHDMVKAGIIDNCLKLFQSAPSSLCSTIAELFRILTNSSAIARSSDAAEIVEPLFNVLLRRDFNIWGQHSALQALVNILEKPQSLASLKLTPSQVIEPLISFLESPSQDIQQLGTELLSHLLAQEHFQQDITTKNAVVPLVRLAGIGILNLQQTAIKALEKISTSWPKAVADAGGIFELAKVIIQDDPQPPHALWESAALVLSNVLRSNADYYFKVPVVVLVKLLHSTLDSTISLALNALAVYERSYGSSAEEMMEAGAMDALLHLIRSHQCEEASAGLLETLFNNVRVREMKVSKYAIAPLSQYLLDPQTRSQSGKLLAALALGNLSQHERHARASDSVSACRALISILEDQPTEEMTMVAICALQNFVMNSRTNRRAVAEAGGILVIQELLLFPNTEVAGQAALLIKFLFSTHTLLEYVSNELIRSLTAALERELWSTATINEEVLKTLHVIFINFPKLHTSEAATLCIPHLVGALKSGSEVAQDSVLDTFFLLKQSWSTMPIDIAKSQAMTAAEAIPILQMLMKTCPPSFHERADTLLHCLPGCLTVTIKRGNNLKQTMGSTNAFCQLTIGNGPTKQTKVVNHSTSPEWKEGFTWAFDVPPKGQKLYIVCKSKNTFGKTTLGKVTIQIDKIVTDGVYSGQFSLSHDGSKDGSSRTLEIEIIWSNRISNDDI 2116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01040 2116 SMART arm_5 183 223 IPR000225 GO:0005515
Mepo4g01040 2116 SMART arm_5 1356 1396 IPR000225 GO:0005515
Mepo4g01040 2116 SMART arm_5 1439 1479 IPR000225 GO:0005515
Mepo4g01040 2116 SMART arm_5 138 181 IPR000225 GO:0005515
Mepo4g01040 2116 SMART arm_5 1270 1310 IPR000225 GO:0005515
Mepo4g01040 2116 SMART arm_5 604 644 IPR000225 GO:0005515
Mepo4g01040 2116 SMART arm_5 1397 1437 IPR000225 GO:0005515
Mepo4g01040 2116 SMART arm_5 225 266 IPR000225 GO:0005515
Mepo4g01040 2116 SMART arm_5 1187 1227 IPR000225 GO:0005515
Mepo4g01040 2116 SMART arm_5 268 317 IPR000225 GO:0005515
Mepo4g01040 2116 SMART arm_5 439 481 IPR000225 GO:0005515
Mepo4g01040 2116 SMART arm_5 1688 1727 IPR000225 GO:0005515
Mepo4g01040 2116 SMART arm_5 525 565 IPR000225 GO:0005515
Mepo4g01040 2116 SMART arm_5 483 523 IPR000225 GO:0005515
Mepo4g01040 2116 SMART arm_5 691 731 IPR000225 GO:0005515
Mepo4g01040 2116 SMART arm_5 1728 1771 IPR000225 GO:0005515
Mepo4g01040 2116 SMART arm_5 996 1045 IPR000225 GO:0005515
Mepo4g01040 2116 SMART arm_5 1815 1855 IPR000225 GO:0005515
Mepo4g01040 2116 SMART arm_5 1524 1565 IPR000225 GO:0005515
Mepo4g01040 2116 SMART arm_5 50 91 IPR000225 GO:0005515
Mepo4g01040 2116 SMART arm_5 92 132 IPR000225 GO:0005515
Mepo4g01040 2116 SMART arm_5 732 772 IPR000225 GO:0005515
Mepo4g01040 2116 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 236 280 IPR000225 GO:0005515
Mepo4g01040 2116 SUPERFAMILY ARM repeat 1157 1525 IPR016024 -
Mepo4g01040 2116 SUPERFAMILY ARM repeat 1538 1925 IPR016024 -
Mepo4g01040 2116 Gene3D - 18 139 IPR011989 -
Mepo4g01040 2116 Gene3D - 1656 1779 IPR011989 -
Mepo4g01040 2116 Gene3D - 1325 1653 IPR011989 -
Mepo4g01040 2116 Gene3D - 1147 1324 IPR011989 -
Mepo4g01040 2116 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 494 536 IPR000225 GO:0005515
Mepo4g01040 2116 Pfam Armadillo/beta-catenin-like repeat 487 522 IPR000225 GO:0005515
Mepo4g01040 2116 SUPERFAMILY ARM repeat 840 1114 IPR016024 -
Mepo4g01040 2116 SMART C2_3c 1989 2085 IPR000008 -
Mepo4g01040 2116 ProSiteProfiles C2 domain profile. 1969 2086 IPR000008 -
Mepo4g01040 2116 Gene3D - 345 612 IPR011989 -
Mepo4g01040 2116 Gene3D - 140 337 IPR011989 -
Mepo4g01040 2116 Gene3D - 1780 1986 IPR011989 -
Mepo4g01040 2116 Gene3D - 613 802 IPR011989 -
Mepo4g01040 2116 Pfam C2 domain 1989 2088 IPR000008 -
Mepo4g01040 2116 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1987 2093 IPR035892 -
Mepo4g01040 2116 Gene3D C2 domain 1988 2114 IPR035892 -
Mepo4g01040 2116 SUPERFAMILY ARM repeat 17 777 IPR016024 -
Mepo4g01040 2116 Gene3D - 839 1130 IPR011989 -
Mepo4g01040 2116 CDD C2 1990 2080 - -
Mepo4g01040 2116 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 5 2110 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01040 Mepo-Chr4 13772243 13782548 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01040 413 695 U-box Gene Family AT2G23140 27.931 1.32e-11 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01040 - - aprc:113846793 3548.83