Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01034 ATGATCACCACCTTCAACGGTGGCTCCGGTGGCCGTACTGTTGTGGTTGGTGTGAAGATGGAATCTAACAGTCATAGCACTGAGTTACTTACATGGTCTTTGGTTAATGTTGCTCAACCTGGTGATCTTATTCTTGCTCTTCATGTTCTTAGAAATGATGAAATTGTGAATCGAGATGGGAAATCTTCTTTGTTTTCTCTTGTCAAAGCATTTGATTCTGTTCTTTCTGGTTATGAAGGATTCTGCAATTTGAAACAGGTGGATCTGAAGCTAAAAATCTGCCGGGGTTCATCAGTGAGGAGAATTTTGGTCAGAGAAGCAAATGAATATTGTGCAACTCATGTTATAGTTGGAAAATCTCAAGGTCTTAGTAAAATTAGACCAACTATTTCTTTACCTAGGTATTGTGCTAAGAAGCTTTCAAAGGATTGTTGGGTTTTTGCTGTTGATAATGGGAAAGTTGTGTTCAAGAGAGAAGGATCACCAACAAATCACGTTGACTTAAAAGGTCGCGGAATTGGGTTGCTTGGTTCGATCCAACGGACATTCAGCAAGAGTTCAAAAGTGCTAAATGATGATATGGAAGAATCAGTATTGCAGGATTCATCTTGCTACCAAGCTGCAGATCAAGAGTCTTATTTCGGTGACGAGGGTGATAGTGAGAAGAACTCATTGGCTATGGTTCCGGTAAAGGCAACTGATGCTGGTTGTAGCATGAGAACTTTACATGACAGAGAAGTAACTGCTTTAAAACCTGGTTGGCCACTACTACATCGTACAATTTCATCATCAGACAGGAAAGTTTCTGAAAGATCGTTGTTTCGTCGGATTTCAGTGGTCCAATGGGCAATGCAGTTGCCCTCTAGAAATCTTTCCTTTCATAAAGATCAATTTTTGGGTCTAGATAGCAAAAGTGGTGCTCTTGTTCCGGTGAATGCCGAAACAGGAATGGTTGCTTCACCTGATCGCAAATCTACGAGCGTTCCAAAAGAATTAGAGGGCCTTCATGAGAAATACTCATCTTCTTGTAGATTATTTAACTACCAAGAACTTGTATCAGCAACATCAAACTTCTTGCCTGAAAATTTGATTGGTAAAGGAGGAAGTAGTCAGGTTTATAAAGGCTGTCTCCCAGATGGAAAGGAACTTGCTGTTAAGATCTTAAAGCCTTCTGATGATGTTTTGAAGGAGTTTGTTTTAGAGATAGAAATTATCACTGCTTTGCATCACAAAAACATCATTTCTCTCATCGGATTCTGCTTTGAGGATGACAATCTTCTTTTGGTCTATGATTTCTTATCAAGAGGGAGCCTTGAACAAAACCTTCAGGGTAATAAGATAAATCCACTTGAGTTTGGTTGGACTGAGAGATATAAGGTGGCGATCGGTGTTGCTGAGGCTTTGGAGTATCTACATAATAATGGTGACCAACCTGTGATCCATCGCGATGTGAAATCATCAAATGTGTTATTATCTGAGGATTTTGAACCTCAGCTCTCTGATTTTGGACTTGCGAAATGGGCATCAACCTCGGCATCATCTATTACCTGCACAGATGTTGCCGGAACTTTTGGGTACTTGGCACCTGAATACTTCATGTATGGTAAAGTAAATGATAAGATTGATGTCTATGCATTTGGTGTGGTGCTTCTTGAGCTTCTTACAGGAAGAAAGCCTATAAGTGGTGATTATCCTAAAGGTCAAGAGAGCCTTGTCATGTGGGCAAGTCCAATTCTAAATAGTGGGAAGCTGTCACAATTGTTGGATCCTAGTTTGGGTGATAACTATGATCATGAAGAGATGGAAAGGATGGTCTTAGCAGCCACACTTTGTATCAGACGTGCTCCAGGAGCTAGGCCTAAAATGAGCTTTATTTTAAAAGTCCTTAAAGGCGACGCCGTTGTAATAAAGTGGGCAAAGCTAGAAATTAATGCTTTGAAAGCATCAGAATTGCTTGATGAAGAAGCTTGTCCACCTTCTGACATACAATCACACCTTAATCTTGCATTGCTTGATGTGGATGATGACACACTCTCTTTGTTCAGTGTTGAGCAAAATGTCTCTTTGGAGGACTACTTGAGAGGCAGGTGGAGTCGTTCATCTAGCTTTGATTGA 2115 0.4043 MITTFNGGSGGRTVVVGVKMESNSHSTELLTWSLVNVAQPGDLILALHVLRNDEIVNRDGKSSLFSLVKAFDSVLSGYEGFCNLKQVDLKLKICRGSSVRRILVREANEYCATHVIVGKSQGLSKIRPTISLPRYCAKKLSKDCWVFAVDNGKVVFKREGSPTNHVDLKGRGIGLLGSIQRTFSKSSKVLNDDMEESVLQDSSCYQAADQESYFGDEGDSEKNSLAMVPVKATDAGCSMRTLHDREVTALKPGWPLLHRTISSSDRKVSERSLFRRISVVQWAMQLPSRNLSFHKDQFLGLDSKSGALVPVNAETGMVASPDRKSTSVPKELEGLHEKYSSSCRLFNYQELVSATSNFLPENLIGKGGSSQVYKGCLPDGKELAVKILKPSDDVLKEFVLEIEIITALHHKNIISLIGFCFEDDNLLLVYDFLSRGSLEQNLQGNKINPLEFGWTERYKVAIGVAEALEYLHNNGDQPVIHRDVKSSNVLLSEDFEPQLSDFGLAKWASTSASSITCTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLTGRKPISGDYPKGQESLVMWASPILNSGKLSQLLDPSLGDNYDHEEMERMVLAATLCIRRAPGARPKMSFILKVLKGDAVVIKWAKLEINALKASELLDEEACPPSDIQSHLNLALLDVDDDTLSLFSVEQNVSLEDYLRGRWSRSSSFD 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01034 704 ProSitePatterns Serine/Threonine protein kinases active-site signature. 479 491 IPR008271 GO:0004672|GO:0006468
Mepo4g01034 704 SMART serkin_6 358 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g01034 704 FunFam Putative receptor-like serine/threonine-protein kinase 433 645 - -
Mepo4g01034 704 Pfam Protein kinase domain 362 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g01034 704 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 11 150 - -
Mepo4g01034 704 SUPERFAMILY Protein kinase-like (PK-like) 339 629 IPR011009 -
Mepo4g01034 704 Gene3D Phosphorylase Kinase; domain 1 322 432 - -
Mepo4g01034 704 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 327 432 - -
Mepo4g01034 704 ProSiteProfiles Protein kinase domain profile. 358 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g01034 704 Gene3D Transferase(Phosphotransferase) domain 1 433 640 - -
Mepo4g01034 704 CDD STKc_IRAK 364 631 - -
Mepo4g01034 704 ProSitePatterns Protein kinases ATP-binding region signature. 364 386 IPR017441 GO:0005524
Mepo4g01034 704 PANTHER OS08G0249100 PROTEIN 191 637 IPR046958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01034 Mepo-Chr4 13703148 13707757 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01034 345 630 Trihelix Transcription Factor Family AT1G68690 45.791 3.71e-77 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Mepo4g01034 Pkinase 3.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01034 - - gmx:100305405 969.148