Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01030 ATGGAGAAATTTGAAGATCTTAAATCGAAGGGATGTAAAATGCTCGGTCCTAGATGTGTTCTTCAGTGTGCTAAAGAAGGAAGACCTCTGCCTAAACAAGGCTTCACATGTTGCTTTACTATGGATGGTGTCAAAATCCTCGCTTCTGGCTTTGAAATGGAGGAGAGGGTTAAGATAGAAGAATTAGTGACTGAGATGGGAGGAGCTCTACATAAACCGACGTCAGATTTGAACTTTGTCATCGTGAAAAATGTTTTGGCTCAAAAGTACAAGTGGGCTTTGAATGTCCTGAAGAAACCAATAGTTACTTATGAATGGTTAAAGCAATGCTCGGATGAGCATCGTGTTGTTCCTCAAGAGTCATATAAGGTTCTTCCTTTCTCTGGGTTAAGGATCTGTGTGACTGGATTCCCAGCAGATAAGCGGAAAGAGATGGAAAAGATTATTTTACAAAATGGTGGAAAATACTGTGCAGAATTGACAAAGAAGTGCACACATTTGATTTCTGATATTCCTGAAGGTGATAAGTATAAGGTGGCAAAACGTTGGGGCCACATTCATATTGTCACAATGAAATGGTTTGATCAATCTGTTGCTCGAAGAGCATGTTTGAATGAGGAGTCCTACCCTGTTCAGAGTGGATCTTTGTCTTCGCGTAAGGTGACTAGGGACTTAACAGCGCAACATAGCCAGGAAAAGGATATTGGGAAAATGCAATCTGGCTCATCCTCAAGAGCTGCAGATTCAAATATGCTAGTTTCAGATTGTGCCGAGTCTATGGATATAGATCCAGAAGCTACACAGTCAGAACATATGTCGTCTGTTTCAAATGTTCCATTATTTGTTAAAGAGGCAGATGCTGAAGCACGTCTATTACAGACCAGCAATGAATTGAACTTAGATGGTGCTGTTGCCAATGATTCTGAATCTGACGACAATGACCTGTACTTAGCAGAGTGCAGAATATCACTTGTTGGTTTTGAAGCTTCTGAAATGCGTAAGCTAGTTAATATGGTGCGTAAAGGTGGAGGCTCCCGATACATGTCTTTAAATGCTAAGTTGACCCACATAGTAATTGGGAATCCTACAGAAATGGAAAAGAAGGATGTAAGGAGTATTGCTGCACAAAGTGTCATTTTTGTTGTTAAAACCTCATGGCTGGAAGATTGTGACCGTCAAAAGAGACAAGTCCCTGTTCTAGGACGTCACACTGCTAATGATCTTGTTCTTCCAAAAGTAAAAGGAGCAGTTACTGGCATTATGCCTATGGATCAAAGTAAAAGCTCAAGCTTTCGCCAAAGCTTCCAAACTGATAAGGTGGTGGGTATTAAGGAATTTGGAGTAATAATGCCAGAATCTTTGGAGAAAAACAAACAAGAGAAACACGATATGGGTATGAATGTTGTGACATTCGGTAAAGCATCGGATAGAACTACGCCACAAACTCAACTTCCTGATAAAAAATTGAGGGGACAAAAGATGACACAACGTGATTCTAATGTACATGTGAAGTCAACAAATGTTTTCAAAGGGAAAACATTTTGTTTCTCAAATTTATTTCCTGAAGAAAGGAGAGCTGAGATTGTTCAGTGGATAAGTCAAGGGGGAGGAGAGATAATAAGTGGGCAAACAAAACAAAGTATCCACTATACTATTGAATGCCATGGTAAACCCAAGTCGACAGGTGATTATGGAAGTACTTATATTTCCAGTCACTGGATACGATCTTGTTTGGAGGATGGATCCTTGCTGGATGTTGACAGTCATATTCTTTATTCTCCACTTCCCTGCCGTGTTCCCTTACCTGGTTTTGAAAATCTCCGGTTTTGTGTTTCACAATATGAGGAGAAAGACAGAATTCTACTTTGGAACTTGTGTAAAGTTCTAGGAGCTAAATTTGCAGATAAGTTGACTAAGAAGGTCACCCATTTGTTGTGTAAATTTACGAATGGGCCCAAGTATGAGGCTTCTTGTAAGTGGGGGATCCGATCAGTTACATCCGAGTGGATATTTGAATGTGTCAAACAGAATGGAGTTATTGCTGTGGATCAATTTATGCCCAAAGAAGTCACTACTCAAGACCGAGAGGCAGGAGCTTGCACAGTGAGTCAATTTCCTACCCAGGCTGTTCAAATGATATATGACATGCCGTCCCAGTTTCCAAGTCAATCACAAAGTTCAAGACACACGGCAAATAAAAATGTTGACAATCATAGGACTCATTCTAAAATATCAAGCATTAATAGCAAAAAGGCAAGGCTCATGGAAGAACCTAGCCTGTATAATAAGGCACCTTCTACAGTAAATCCAGGTATTCATGTCTCTGACATGAATTTTTCTAAAGCCAATATGCTCAAGGATGCTCAGGAGGCTGTTCAAATGATAAATGACACACTGCCCCAGTTTCCAAGTCAATTACAAAGCATGAGAAACATGGCAGATAAAAATGTGGATAGTAGCGATGCCAATCACGGGACTCATTCTAAAATATCAAGCATTAATAGCATAAAGTCAAGGCTGGTGGAAGAACCTGGCATGTATAATAAGGCACCTTCTACAGTAAATTTAGGTATTCATGTCTCTGACTTGAATTTTTCTGAAGACAATATGCTCAAAGATGATCCGGAGGCAACCCATGCAGTTCCTGATGTTGCTGCTGCAATTGAGGACTTGTTAGAGCAGACAAGCAAGATGCATGATCAGAGATCCCCAGGGAATACAGGGTGTGAGAGAAGTATTTACACATCTGATTGTCCAGTCATTGGTGAAGACAATCCAAATCCTCGAACTGTCTTTGGATTATCGAAGCATTGGTTAAACAGAATTGGAAGCAATGATGATAATGGCGAGACTTCTAAAGAACGAAAAGTGGGAATGTATGATGCTTTTAGTGAAACCCAAACAGAATCTCAGATTGTTGGTTATGAAGAAGATTTGTCTGGAAGGCAAATGCTTATAGATAGAGTTCTAACTCGAAGTAGCATGCAGTGA 2991 0.4009 MEKFEDLKSKGCKMLGPRCVLQCAKEGRPLPKQGFTCCFTMDGVKILASGFEMEERVKIEELVTEMGGALHKPTSDLNFVIVKNVLAQKYKWALNVLKKPIVTYEWLKQCSDEHRVVPQESYKVLPFSGLRICVTGFPADKRKEMEKIILQNGGKYCAELTKKCTHLISDIPEGDKYKVAKRWGHIHIVTMKWFDQSVARRACLNEESYPVQSGSLSSRKVTRDLTAQHSQEKDIGKMQSGSSSRAADSNMLVSDCAESMDIDPEATQSEHMSSVSNVPLFVKEADAEARLLQTSNELNLDGAVANDSESDDNDLYLAECRISLVGFEASEMRKLVNMVRKGGGSRYMSLNAKLTHIVIGNPTEMEKKDVRSIAAQSVIFVVKTSWLEDCDRQKRQVPVLGRHTANDLVLPKVKGAVTGIMPMDQSKSSSFRQSFQTDKVVGIKEFGVIMPESLEKNKQEKHDMGMNVVTFGKASDRTTPQTQLPDKKLRGQKMTQRDSNVHVKSTNVFKGKTFCFSNLFPEERRAEIVQWISQGGGEIISGQTKQSIHYTIECHGKPKSTGDYGSTYISSHWIRSCLEDGSLLDVDSHILYSPLPCRVPLPGFENLRFCVSQYEEKDRILLWNLCKVLGAKFADKLTKKVTHLLCKFTNGPKYEASCKWGIRSVTSEWIFECVKQNGVIAVDQFMPKEVTTQDREAGACTVSQFPTQAVQMIYDMPSQFPSQSQSSRHTANKNVDNHRTHSKISSINSKKARLMEEPSLYNKAPSTVNPGIHVSDMNFSKANMLKDAQEAVQMINDTLPQFPSQLQSMRNMADKNVDSSDANHGTHSKISSINSIKSRLVEEPGMYNKAPSTVNLGIHVSDLNFSEDNMLKDDPEATHAVPDVAAAIEDLLEQTSKMHDQRSPGNTGCERSIYTSDCPVIGEDNPNPRTVFGLSKHWLNRIGSNDDNGETSKERKVGMYDAFSETQTESQIVGYEEDLSGRQMLIDRVLTRSSMQ 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01030 996 ProSiteProfiles BRCT domain profile. 504 591 IPR001357 -
Mepo4g01030 996 PANTHER REGULATOR OF TY1 TRANSPOSITION PROTEIN 107 2 801 - -
Mepo4g01030 996 ProSiteProfiles BRCT domain profile. 604 687 IPR001357 -
Mepo4g01030 996 MobiDBLite consensus disorder prediction 476 497 - -
Mepo4g01030 996 SMART BRCT_7 314 394 IPR001357 -
Mepo4g01030 996 SMART BRCT_7 506 581 IPR001357 -
Mepo4g01030 996 SMART BRCT_7 38 114 IPR001357 -
Mepo4g01030 996 SMART BRCT_7 124 201 IPR001357 -
Mepo4g01030 996 SMART BRCT_7 601 677 IPR001357 -
Mepo4g01030 996 CDD BRCT_TopBP1_rpt2_like 602 677 - -
Mepo4g01030 996 FunFam Transcription coactivator 294 404 - -
Mepo4g01030 996 Gene3D BRCT domain 126 212 IPR036420 -
Mepo4g01030 996 Gene3D BRCT domain 38 125 IPR036420 -
Mepo4g01030 996 FunFam Transcription coactivator 502 597 - -
Mepo4g01030 996 Pfam BRCT domain, a BRCA1 C-terminus domain 506 588 IPR001357 -
Mepo4g01030 996 SUPERFAMILY BRCT domain 507 593 IPR036420 -
Mepo4g01030 996 CDD BRCT 44 110 - -
Mepo4g01030 996 ProSiteProfiles BRCT domain profile. 312 398 IPR001357 -
Mepo4g01030 996 SUPERFAMILY BRCT domain 568 688 IPR036420 -
Mepo4g01030 996 SUPERFAMILY BRCT domain 126 211 IPR036420 -
Mepo4g01030 996 FunFam DNA topoisomerase II binding protein 1 127 219 - -
Mepo4g01030 996 Gene3D BRCT domain 299 400 IPR036420 -
Mepo4g01030 996 FunFam Transcription coactivator 38 125 - -
Mepo4g01030 996 SUPERFAMILY BRCT domain 313 398 IPR036420 -
Mepo4g01030 996 MobiDBLite consensus disorder prediction 719 746 - -
Mepo4g01030 996 Gene3D BRCT domain 501 597 IPR036420 -
Mepo4g01030 996 Gene3D BRCT domain 1 35 IPR036420 -
Mepo4g01030 996 ProSiteProfiles BRCT domain profile. 41 124 IPR001357 -
Mepo4g01030 996 ProSiteProfiles BRCT domain profile. 122 211 IPR001357 -
Mepo4g01030 996 Pfam BRCA1 C Terminus (BRCT) domain 314 390 IPR001357 -
Mepo4g01030 996 Pfam BRCA1 C Terminus (BRCT) domain 42 110 IPR001357 -
Mepo4g01030 996 MobiDBLite consensus disorder prediction 232 248 - -
Mepo4g01030 996 MobiDBLite consensus disorder prediction 215 248 - -
Mepo4g01030 996 CDD BRCT_TopBP1_rpt2_like 126 201 - -
Mepo4g01030 996 Gene3D BRCT domain 604 697 IPR036420 -
Mepo4g01030 996 Pfam twin BRCT domain 130 193 IPR001357 -
Mepo4g01030 996 Pfam twin BRCT domain 607 669 IPR001357 -
Mepo4g01030 996 SUPERFAMILY BRCT domain 2 123 IPR036420 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01030 2 995 Core DNA Replication Machinery Family AT1G77320 45.140 0.0 805
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01030 K10728 - gmx:100804966 1182.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g01030 4 13647725 13658594 Mepo4g01030 4 13647725 13658594 ECH