Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01028 ATGGATATCAAAGCAATGTTCCTTCTCCTTCTCTTCACCCTTTTCATAGCTACTCCTTCTGCTTCTGCTGCATCATGTCCCATGGATCTCAGCTATGTTGAGACCTTCCCATGGGACTCATCATCATGCAGAGATCCAATTGACTCACAACACTGTTGTCAATCACTTCTTAGTCTCTTTGGTATAGGACTTGCAAAACATCTCAAAGAAACTTCAATATTTCAACTCCCAGATGAAAACACTTCCACTACATGTTTACAAGACTTCCAACTCAAGCTTTCATCCTTAAGAATCCAACCTGAATTAGTCCCTACTTGTTTCCAAAACTCAACTCAGTTTGTCACAAACACATCATACTGTGCAGGTATCACAAACCTCACAGATTGGAGAGAAAAGGTTGGTATCATTAGTCCTTTAGACACTGCTTGTAATGGTGATTTGAGTTCTGAAACTAGCTGTGGCATTTGTACTGATGCTGGTTTCAAAGTCACTACTCAGCTTACAAGTATTGATCCAAAAAATGCAACTAAGTGTTTTTATTTTTCAATTTTATATGCTATTGGTGTTGTGAATAAATTTGGTCCTACACATCCTGAGACAGCAGCTTGTATACTTGGTATGCCACTTTCATCAAAAGGATCATCAAATAATGGAAAAATTTTGAAACTTGTTTTTGGGTTAATAGGTGCTCTTGTTGGTGTTGTTCTAGCTTTTGTGCTTATAATTATGTATAGGAAATGGGATAAGATGAGGAAGGAGAATATTTATCACAGGTCAATTGAAAACAGTGTTAGAGACAGTGTTTTGCCTAATACAGGAGCTAAATGGTTTCATATATCAGAGCTTGAAAAGGCTACAAACAAGTTTTCACAGAAGAATATGATTGGTCAAGGTGGTGATGGTGTTGTGTACAAAGGAACACTTTCAGATGGAACTTTGGTTGCAGTGAAAGAAATTTTTGATTTGGATACTAGAGGTGATGAAGAGTTTATCTATGAAGTTGAGATTATTAGCAAAATTAAGCATAGGAATCTTCTTGCTTTAAGAGGCTGTTGTGTTGCAAGTCATAATGTAAAAGGTAAGAGAAGGTTTTTAGTTTATGATTATATGCCTAATGGAAGTTTAAGTTACCAATTATCAGTTAATGGTGCTAATAAGCTTACTTGGCCACAAAGGAAGAATATTATACTTGATGTGGCTAAAGGGCTAGCTTATTTGCATTATGAAATCAAACCGCCGATTTTTCATCGCGATATTAAGGCGACGAATATACTTTTGGATTCGAAAATGAAAGCGAAAGTTGCTGATTTTGGTTTGGCAAAACAAGGTAATGAAGGACAATCTCATCTCACAACAAGAGTAGCTGGTACATATGGTTATTTAGCACCTGAGTATGCTTTATATGGACAATTAACTGAGAAAAGTGATGTTTATAGTTTTGGCATTGTGATACTTGAGATAATGAGTGGTAGAAAAGTGCTTGATACAATGAATTCACCAGTTGTTTTGATCACTGATTGGGCTTGGACACTTGCAAAAACAGGAAAAGTTGATGAAATATTTGATCAAGCAGTTAAAGATGAAGGGCCAGAAAAAATCATGGAAAGGTTTGTACTTGTTGGAATTCTTTGTGCTCATGCAATGGTTGCATTAAGACCTACTATTGCTGAGGCAATTAAGATGTTAGAAGGTGATATTGATATTCCTAATTTACCAGATAGGCCTGTTCCACTTGGTCATGAATCTTTTCAATCTTCTCTTTTGAATGGTATGCAAAGTGGAAGATCAACACCTTATTATAATTCATCTTATTCTACAAGTATGATTAGCAAAATTAGTTTAAAATGA 1848 0.3571 MDIKAMFLLLLFTLFIATPSASAASCPMDLSYVETFPWDSSSCRDPIDSQHCCQSLLSLFGIGLAKHLKETSIFQLPDENTSTTCLQDFQLKLSSLRIQPELVPTCFQNSTQFVTNTSYCAGITNLTDWREKVGIISPLDTACNGDLSSETSCGICTDAGFKVTTQLTSIDPKNATKCFYFSILYAIGVVNKFGPTHPETAACILGMPLSSKGSSNNGKILKLVFGLIGALVGVVLAFVLIIMYRKWDKMRKENIYHRSIENSVRDSVLPNTGAKWFHISELEKATNKFSQKNMIGQGGDGVVYKGTLSDGTLVAVKEIFDLDTRGDEEFIYEVEIISKIKHRNLLALRGCCVASHNVKGKRRFLVYDYMPNGSLSYQLSVNGANKLTWPQRKNIILDVAKGLAYLHYEIKPPIFHRDIKATNILLDSKMKAKVADFGLAKQGNEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILEIMSGRKVLDTMNSPVVLITDWAWTLAKTGKVDEIFDQAVKDEGPEKIMERFVLVGILCAHAMVALRPTIAEAIKMLEGDIDIPNLPDRPVPLGHESFQSSLLNGMQSGRSTPYYNSSYSTSMISKISLK 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01028 615 PANTHER OS01G0750732 PROTEIN 41 575 - -
Mepo4g01028 615 Pfam Protein kinase domain 290 501 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g01028 615 CDD STKc_IRAK 295 564 - -
Mepo4g01028 615 ProSiteProfiles Protein kinase domain profile. 289 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g01028 615 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Mepo4g01028 615 ProSitePatterns Serine/Threonine protein kinases active-site signature. 414 426 IPR008271 GO:0004672|GO:0006468
Mepo4g01028 615 Gene3D Phosphorylase Kinase; domain 1 250 369 - -
Mepo4g01028 615 SUPERFAMILY Protein kinase-like (PK-like) 274 581 IPR011009 -
Mepo4g01028 615 Gene3D Transferase(Phosphotransferase) domain 1 370 568 - -
Mepo4g01028 615 SMART serkin_6 289 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g01028 615 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 370 570 - -
Mepo4g01028 615 Pfam SPARK 21 178 IPR043891 -
Mepo4g01028 615 FunFam Receptor-like serine/threonine-protein kinase At4g25390 254 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01028 Mepo-Chr4 13634109 13636194 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01028 23 592 Receptor kinase-like Gene Family AT1G11050 51.926 0.0 578
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Mepo4g01028 Pkinase 1.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01028 - - mtr:25482441 1158.28