Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01017 ATGGTGAAAGAAACTGAGTATTATGATATCCTTGGAGTTTCTCCTTCTGCTTCTGATGATCAAATTCGCAAAGCTTATTATCATAAGGCAAAGCAAGTTCATCCTGATAGAAATCAAAATGATCCCAATGCTGCACACAAATTCCAGATTTTGGGAGAAGCATATCAGGTTTTGAGTGATCCAGTACAAAGGACTGGATATGATCAAAATGGCAAGCATTCTGTATCTAGAGAAACTATGCTTGATCCAATGGCTGTGTTTGCCTTGCTCTTTGGAAGTGAATTGTTTGAGGACTACGTTGGGCATCTAGCTGTTGCATCGATGGCTTCTTCTGAACTAGGTGATGAAAGTGAGGATTTGCAGGAGAAGTTAAAGGAAGTCCAAAAAGGAAGGGAAGAAAAGCTAGCAAGATTTTTGAAGGATTTTCTCAGCCAATATGTTCGTGGTGACCAAAAGGGTTTCTACCAGCGCGCAGAATCTGAAGCAAGACGGCTTTCTCATGCAGCCTTTGGAGTTGACATGTTACATACCATCGGCTATATATACTCAAGACAAGCAGCACAAGAACTAGGGAAAAAGGCCCTTTATCTTGGAGTTCCATTTCTGGCTGAATGGGTTCGCAATAAAGGACATTTTTGGAAATCACAGTTAACAGCTGCTAAAGGTGCTTTTCAGTTGCTCCAACTTCAAGAAGAACTCAGCAAGCAATTTAAATCGAGTGGTGGTTGCCCTGAAAATGTTGACTCCCATATTCGTCTTAATAAAGACACTTTGTTGAATTCCTTGTGGAAGTTGAATGTAGTGGACATAGAAGTAACCCTTGCACACGTGTGTCAAATGGTGCTAAAGGAAAACAATGTTAGGAGAGATGAACTTAAAGTTCGAGCTACCGCTCTTAAAATTCTTGGGAAGATATTTCAGGAAAAGAATGCAAAAGGAGAAACACTGAAGAAGAAACTCGCTGTTGATTCTGATGATGAAGGAAGCAGCTCTGATTCATCAGACGATGAATCATCACATAGAGCACTAACCTATCGAACTCCCTTTTTCAATCAGGGTATCGGTAGGCTCTTCAAATGCCTTTGTAATCCCGCATTTGATGTGGATGATGAAGAGGAGATAGTTTACAAAAGCAAATGA 1140 0.4044 MVKETEYYDILGVSPSASDDQIRKAYYHKAKQVHPDRNQNDPNAAHKFQILGEAYQVLSDPVQRTGYDQNGKHSVSRETMLDPMAVFALLFGSELFEDYVGHLAVASMASSELGDESEDLQEKLKEVQKGREEKLARFLKDFLSQYVRGDQKGFYQRAESEARRLSHAAFGVDMLHTIGYIYSRQAAQELGKKALYLGVPFLAEWVRNKGHFWKSQLTAAKGAFQLLQLQEELSKQFKSSGGCPENVDSHIRLNKDTLLNSLWKLNVVDIEVTLAHVCQMVLKENNVRRDELKVRATALKILGKIFQEKNAKGETLKKKLAVDSDDEGSSSDSSDDESSHRALTYRTPFFNQGIGRLFKCLCNPAFDVDDEEEIVYKSK 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01017 379 ProSiteProfiles dnaJ domain profile. 6 71 IPR001623 -
Mepo4g01017 379 Coils Coil 117 137 - -
Mepo4g01017 379 CDD DnaJ 6 60 IPR001623 -
Mepo4g01017 379 Pfam DnaJ domain 6 68 IPR001623 -
Mepo4g01017 379 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 2 331 - -
Mepo4g01017 379 Pfam X-domain of DnaJ-containing 128 312 IPR026894 -
Mepo4g01017 379 SUPERFAMILY Chaperone J-domain 2 101 IPR036869 -
Mepo4g01017 379 PRINTS DnaJ domain signature 43 63 IPR001623 -
Mepo4g01017 379 PRINTS DnaJ domain signature 8 26 IPR001623 -
Mepo4g01017 379 PRINTS DnaJ domain signature 63 82 IPR001623 -
Mepo4g01017 379 PRINTS DnaJ domain signature 26 41 IPR001623 -
Mepo4g01017 379 SMART dnaj_3 5 63 IPR001623 -
Mepo4g01017 379 ProSitePatterns Nt-dnaJ domain signature. 48 67 IPR018253 -
Mepo4g01017 379 Gene3D DnaJ domain 1 85 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01017 Mepo-Chr4 13528754 13532958 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01017 7 68 C2H2 Transcription Factor Family AT1G74250 41.791 1.71e-08 54.3