Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01013 ATGTTCGCCAACGTCATACAAATCAACCCTCCATTCACCGCCGCTTTCTGCCAACACAGACACTCCTTTCTCAGCTCTCCGCCGCGTCACTCTTTTCTCAGGTCTTGTGTGAAAATGGGTTCCTCTGAGAATAAATTCAAAACCCTATCTACTGTTGAAGAAGAAGAAGAAGAAGATGGTTCTACAATTAACAACAATTTCTATGATGTTTATGGTCCCCAAGCTAAGGCAGATGTTGTTTTCAAGTCAGAAGATAATTCAACTTTGAGTCTCGTTGACATTCAAGGACTAGTAACTTGGGTGCTTGGGGAAGGATTTATGCCATCGTGGGTTTTTATCAAGAATAAACCTCTTATTCTCAAAGTAGTTATGCTCTACATACCAGGCCTGGATGCAGCTTTGTACCTGTCACTGTCCAAAGTGCTTCCTAATTTAAAAAAAGCATGTGGCAAACCAAGACCAGTCCATGCTCTCAGTTGTGTATCAGATAGTATGCAGACAATAGACGCACTCCTAACATGCAAGCAGAAAAGAAAAAGGGATGAAAGCGATTCAATTACGAAGAAATCTACTTTGGCATCTCAACAAGAAGAAGTCCGTGGTGGTACTGGCAGTCTATCATTTACGGAGCTTACTAAAGACATACCTTTCCCTGTTTCATACTATACCTTAACAGAAAGAGATCTGGAGGAGAATGAGTATCCTGTTAATAAGCCAGGTTTTGTTTCTACTCTTCCTGCTCCTCCGGGGTCTCCCTATATTGAGATGTTGGCAGTTGACTGTGAGATGTGCATAACAGGCGAGGGGTTTGAGCTAACAAGAGTTACTCTGGTGGATGTCAAAGGACAGGTTTTGTTAGATGAATTGGTTAAACCTTCAAATCATATCACTGATTACAATACAAGATTTAGTGGAATAACTGCCGAGATGTTAGATGGGGTGACGACAAATTTGACAGACATTCAGGAAAAGTTTCAAAAACTGGTTTACAAAGAAACTATTCTTGTTGGGCATTCTTTGGAAAATGATTTATTAGCATTGAAGATATCACACGACTTGGTCATTGACACAGCAGTATTATACAAACACCCCCGAGGGTCTTCCCATAAAAGTGCTCTACGGTTTCTTACTAAAAGATTTCTTTCAAGGGAGATACAACAATCGGGCGATGGACATGACAGCGTCGAAGATGCTAGGGCTACCATGGAATTGGCACTATTGAAGATCAGAAATGGGCCTGGCTTTGGTGCCCCTCCATCCTTTACGCGAAAAAAGCTCCTTTCCATTTTGGGTGAGTCTGGCAAGACTTCTTCAATGATTGATGACATATCGATAGTAAAACGATTTGCCTCCGAGTCCTCTAATGCAATTCCGGTGACATCTGATGAAGAAGCACTTTCTAAAACCATCAAGGAGTTGAAGAATGAAAAGGTGCATTTTATTTGGACTCAATTTTCAGAGTTACACTCATACTTGAAGAAACAAGCTGAGGATTCAGAAAGCTTAAATAAAAAACTTGCAGAGATGATTGCATTAAATACATGTCAGAAGAGTTCTTCGAATGGGAAAGGCCTCAAGTCGAATATATCTGCTGAACTGAAGGAAATTGTTGCTCGTATGGATGTTAGAATTCATAAACTGTATAAATCATTACCAACTAATGCTATGATGATAGTTTGCTCTGGTCATGGAGACACGGCAGTTGTTCGCAGGTTGAGGAAAATGCTTACGGAGGAGGGTGAAAGTTATTATGGTCGTGAGAAGATTTTGGAAAGCTTGGGAGAGTTTCAGGCTAGAGCTGAAGTAGCCCTGTGTTTTGTAGGTGTAAAACACTAA 1836 0.4074 MFANVIQINPPFTAAFCQHRHSFLSSPPRHSFLRSCVKMGSSENKFKTLSTVEEEEEEDGSTINNNFYDVYGPQAKADVVFKSEDNSTLSLVDIQGLVTWVLGEGFMPSWVFIKNKPLILKVVMLYIPGLDAALYLSLSKVLPNLKKACGKPRPVHALSCVSDSMQTIDALLTCKQKRKRDESDSITKKSTLASQQEEVRGGTGSLSFTELTKDIPFPVSYYTLTERDLEENEYPVNKPGFVSTLPAPPGSPYIEMLAVDCEMCITGEGFELTRVTLVDVKGQVLLDELVKPSNHITDYNTRFSGITAEMLDGVTTNLTDIQEKFQKLVYKETILVGHSLENDLLALKISHDLVIDTAVLYKHPRGSSHKSALRFLTKRFLSREIQQSGDGHDSVEDARATMELALLKIRNGPGFGAPPSFTRKKLLSILGESGKTSSMIDDISIVKRFASESSNAIPVTSDEEALSKTIKELKNEKVHFIWTQFSELHSYLKKQAEDSESLNKKLAEMIALNTCQKSSSNGKGLKSNISAELKEIVARMDVRIHKLYKSLPTNAMMIVCSGHGDTAVVRRLRKMLTEEGESYYGREKILESLGEFQARAEVALCFVGVKH 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01013 611 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 68 419 IPR047021 GO:0004527
Mepo4g01013 611 FunFam RNA exonuclease NEF-sp 253 416 - -
Mepo4g01013 611 SUPERFAMILY Alkaline phosphatase-like 422 566 IPR017850 -
Mepo4g01013 611 CDD REX1_like 257 406 IPR034922 -
Mepo4g01013 611 SMART exoiiiendus 255 414 IPR013520 -
Mepo4g01013 611 Pfam Exonuclease 258 404 IPR013520 -
Mepo4g01013 611 Gene3D - 254 412 IPR036397 GO:0003676
Mepo4g01013 611 SUPERFAMILY Ribonuclease H-like 256 408 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01013 Mepo-Chr4 13478167 13489230 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01013 238 404 C2H2 Transcription Factor Family AT2G48100 30.811 3.56e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01013 K14570 - gmx:100802793 887.486