Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01012 ATGGTGCCACCGGGACCGCCGACTCCGATTGGTGGTTCCCAGTCTGTTTCGCCGTCGCTTATGAGATCAAATTCGGGGATGATGGGAGGTCAAGGAGGACAACCTTCTTTTCCGTCGTTGGTTTCGCAGAGGAATCAGTTTAATAACATGAACAACATGAATATGTTGGGGAACATGTCTAATGTTGCTTCCATGATGAATCAGTCTTTTTCAAATGGGATTCCAAACTCGGGGATGTCTGGAATGGGAAGTGGTCAGAGGGGTGGTATGGATGCTGGGGCGGAGCAGGACCCATTGTCTGGTGTTGGGAATGGAATGGGATTTGGTAATCAGTCGTCGTCGTTTGGACAATCGAATGTTGCTAACCCTGGTTCGTCTGGTCAAGGACAAGGCCAAGGTCAGCAATTTTCGAACCCTTCAGGGAATCAGTTGTTGTCCGATCAACAACATACACAACAGCTTGACGTTCAAAATTTCCAACATGGTCAGCAGCAGTCAGCACAGCAGTTTTCGGCTCCAATGAACACTCAACAACACCAACAGCATCAGCAGAACCAGCAACATTTTCAATCAATGCGAGGAGGGATAGGTGGTATCGGACCTGTGAAGATGGAACCACAGGGAAACAACGATCAGTTTGGGCAGCATCAGTTGTCGTCGCTGAGGGGTCTTGCTCAGGTGAAAATGGAACCGCAACAACTTCAAACAATGAGAGGTATGTCGGCTGTAAAAATGGAGCCCCAACATAATGATCAGCCATTTTTGCATCAACAGCAGCAACAGCAACAGCAACAACAACAACAACTCCTCCATATGTCGAGGCAAACCTCTCAGGCTACTGCTGCTCAGATGAATCTTTTGCAACAACAGAGGATTTTGCAATTCCAACAGCAGCAACAACTCTTAAAATCAATGCCTCCGCAGCAACGGTCCCAGCTTCCCCAGCAGTTTCAACAGCAGAATATGCCAGTAAGGTCTCCTGCGAAACCAGCATATGAACCTGGAATGTGTGCTAGGCGGCTGACACATTACATGTATCAGCAACAACATAGACCTGAAGATAACAACATTGAGTTCTGGAGGAAATTTGTTGCCGAGTATTTTGCTCCAAATGCCAAAAAGAAGTGGTGTGTTTCCATGTATGGAAGTGGAAGACAAACAACTGGAGTTTTCCCTCAGGACATATGGCACTGCGAAATATGTAATCGCAAACCTGGCCGTGGGTTTGAGGCAACTGCCGAGGTTCTTCCAAGGCTTTTCAAAATAAAGTATGAAAGCGGTACTTTAGAAGAGCTACTGTATGTTGACATGCCTCGTGAATATCATAATTCCTCTGGCCAAATTGTTCTAGATTATGCCAAAGCAATCCAAGAAAGTGTTTTTGAGCAACTTCGCGTTGTTCGGGACGGTCAACTTCGAATAGTTTTCTCTCCAGATCTGAAGATATGCTCTTGGGAGTTTTGTGCTCGGCGTCATGAAGAGCTCATCCCTAGAAGATTGTTAATTCCTCAGGTTAGTCAGCTTGGAGCAGTTGCTCAAAAATATCAGGCATGTACACAAAATGCAGCAGCCAATCAATCTGTTCCAGAGTTACAAAATAATTGCAATCTGTTTGTTGCATCAGCCCGTCAGCTGGCAAAAGCCTTAGAAGTTCCTTTGGTTAATGATTTAGGATATACAAAGAGATATGTGCGGTGTCTACAAATATCAGAAGTGGTAAATAGTATGAAAGACTTGATAGATTATAGCAGAGAAACAGGGACTGGACCTATGGACAGCTTAGCCAAATTCCCTCGGAGAACAAGTAATTCATCTGGACATCATAATCAGGCGCAACAGTCTGAAGATCAATTACAGCAGCAACAACAGCATATGGTGGCCCCCAACTCAAATGGTGATCAAAACTCTGTGCAAGCTGCTGCCATGCAAATCCCTTCTAACAATGGTGTGGTAAGTGTAAATAACAATGTCAATTCAGCATCTGCATCGACCACCACAAGCACCATTGTTGGACTTCTCCACCAGAACTCTATGAACGCTAGACAGCAAAATTCAATGAACAATGCAAGCAGTCCATATGGAGGTAGTTCTGCCCATATTCCATCCCCAGGTTCATGCAGTACAGTGCCACAGGCACAACCAAACTCGTCCCCTTTTCATTCACCAACACCGTCCTCATCTAACAACAATCCACAAACTTCTCACCCTGGCTTAACATCTGCAAATCACATGGGTACAGTAAACTCACCAGCTAATATTTCCATGCAACAACAGCAGGCATCTATTTCTGGTGAAGCCGACCCTAGTAATGATGCTCAGAACTCGGTCCAGAAAATAATTCATGATATGATGATGTCCTCCCAGATGAACGGAACAGGTGGAATGGTAGGTGCCAATTCTCTCGGAAATGACATGAAGAATGTAAATGGTATCCTACCGGTGAATACTAATACAGGCCTCAACGGTGGCAATGGCATGATGAGTAATGGAGGTGTGAACAGTAATTCGGGTGTTGGGGTTGGTGGTTATGGCGCAATGGGTCTTGGTCCATCTGGTTTACCCAATGGAATGAGGCCTGGAATGGGAAATAATTCAGTCATGAATGGAAGGGGAGGAATGGCATCGATTGCTCGGGAACAAGCCATGAATCATCAGCAGGATTTGTCAAGCCAGCTACTTAGTGGGTTAGGAGCAGTAAATGGTTTTAATAATCTTCAATTTGATTAG 2727 0.4507 MVPPGPPTPIGGSQSVSPSLMRSNSGMMGGQGGQPSFPSLVSQRNQFNNMNNMNMLGNMSNVASMMNQSFSNGIPNSGMSGMGSGQRGGMDAGAEQDPLSGVGNGMGFGNQSSSFGQSNVANPGSSGQGQGQGQQFSNPSGNQLLSDQQHTQQLDVQNFQHGQQQSAQQFSAPMNTQQHQQHQQNQQHFQSMRGGIGGIGPVKMEPQGNNDQFGQHQLSSLRGLAQVKMEPQQLQTMRGMSAVKMEPQHNDQPFLHQQQQQQQQQQQQLLHMSRQTSQATAAQMNLLQQQRILQFQQQQQLLKSMPPQQRSQLPQQFQQQNMPVRSPAKPAYEPGMCARRLTHYMYQQQHRPEDNNIEFWRKFVAEYFAPNAKKKWCVSMYGSGRQTTGVFPQDIWHCEICNRKPGRGFEATAEVLPRLFKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGAVAQKYQACTQNAAANQSVPELQNNCNLFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRETGTGPMDSLAKFPRRTSNSSGHHNQAQQSEDQLQQQQQHMVAPNSNGDQNSVQAAAMQIPSNNGVVSVNNNVNSASASTTTSTIVGLLHQNSMNARQQNSMNNASSPYGGSSAHIPSPGSCSTVPQAQPNSSPFHSPTPSSSNNNPQTSHPGLTSANHMGTVNSPANISMQQQQASISGEADPSNDAQNSVQKIIHDMMMSSQMNGTGGMVGANSLGNDMKNVNGILPVNTNTGLNGGNGMMSNGGVNSNSGVGVGGYGAMGLGPSGLPNGMRPGMGNNSVMNGRGGMASIAREQAMNHQQDLSSQLLSGLGAVNGFNNLQFD 908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01012 908 MobiDBLite consensus disorder prediction 1 42 - -
Mepo4g01012 908 MobiDBLite consensus disorder prediction 597 636 - -
Mepo4g01012 908 MobiDBLite consensus disorder prediction 67 83 - -
Mepo4g01012 908 MobiDBLite consensus disorder prediction 587 636 - -
Mepo4g01012 908 Pfam LIM-domain binding protein 340 594 IPR029005 -
Mepo4g01012 908 MobiDBLite consensus disorder prediction 12 42 - -
Mepo4g01012 908 MobiDBLite consensus disorder prediction 67 202 - -
Mepo4g01012 908 MobiDBLite consensus disorder prediction 105 192 - -
Mepo4g01012 908 MobiDBLite consensus disorder prediction 754 773 - -
Mepo4g01012 908 MobiDBLite consensus disorder prediction 683 749 - -
Mepo4g01012 908 PANTHER LIM DOMAIN-BINDING PROTEIN 212 902 IPR029005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01012 Mepo-Chr4 13467078 13475859 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01012 1 812 C2H2 Transcription Factor Family AT1G43850 60.070 0.0 740
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01012 - - gmx:100787573 1214.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g01012 4 13467078 13475859 Mepo3g06766 3 81406305 81409652 PCT
Mepo3g07510 3 88450320 88453317 Mepo4g01012 4 13467078 13475859 PCT