Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01005 ATGGAGCATGAAAGTCCCTCATTTAACAACAACCGTTCGACACAATCAAGCTCTGCTCAAGGAAACACCACCACCAACAACAACAGCAACGCCAGCACTGGCGTTGCAATTGAGAACCAACATTCAGCTCCAGCAACGGGCGAGGAAGTGCGTATACCCATCAGTCATGTGACAAGAGTCATGCAGAATGTTCTTCCACCAGACACAATAATCACTGATGATGCTAAGGAGTTAATGCAATTGTTTGTGTCTAAATTTATGAACAAGGTCACAAGTGAGGCTTTCCAACAAGCCAATGTAGAACATCAAATGACTGTTTCTGCTGATGATTTACTATGGACGGTGAATAGGTTGGGCTTTGAGGAGTGTGTTCGGTCTGTTGGGAAAGACCTCAAAAACCATCGCAACCACATGGATGGGTCAGGTGCTAGTGGCTCAAACAATGCCAATGATGATGACCAACGTTGA 468 0.4509 MEHESPSFNNNRSTQSSSAQGNTTTNNNSNASTGVAIENQHSAPATGEEVRIPISHVTRVMQNVLPPDTIITDDAKELMQLFVSKFMNKVTSEAFQQANVEHQMTVSADDLLWTVNRLGFEECVRSVGKDLKNHRNHMDGSGASGSNNANDDDQR 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01005 155 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 18 141 IPR027113 GO:0001228|GO:0006355|GO:0016602
Mepo4g01005 155 MobiDBLite consensus disorder prediction 7 32 - -
Mepo4g01005 155 SUPERFAMILY Histone-fold 48 142 IPR009072 GO:0046982
Mepo4g01005 155 Gene3D Histone, subunit A 40 155 IPR009072 GO:0046982
Mepo4g01005 155 MobiDBLite consensus disorder prediction 1 32 - -
Mepo4g01005 155 MobiDBLite consensus disorder prediction 132 155 - -
Mepo4g01005 155 MobiDBLite consensus disorder prediction 139 155 - -
Mepo4g01005 155 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 51 115 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01005 Mepo-Chr4 13305308 13306920 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01005 52 154 CCAAT-HAP3 Transcription Factor Family AT3G53340 38.679 1.23e-19 79.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Mepo4g01005 CBFD_NFYB_HMF 6.6e-13 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01005 K08065 - zof:122036918 81.6481