Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g01003 ATGGAGCATGGATGTCCCTCGTTTAACAACAATCGTTCGGCACATTTAAGCCTGCAAGATTTACCTCCAACAACAAATGAGGAACTGTGTCTTCCCATTCGAAATTTGACAAGAATCATGCGGCATGCTCTTCCATCGTACGCAAAAATATCTCAAGATGCCAAGACAACAACACAATTGTGTGTGTCTGATTTCACGGGCATCATCATCACCGAGGTTGTTGAGAAATGCAATGAAGAGAGTCGAAAGATCATTAGTGGTGAAGATTTAATATGGACCATGGGTAGGTTAGGGTTTGAGGACTATGTTGGTCCTCTATCTCTTCTCCTCCAAAACTATCGCAACCATGAGGCTCAATTCAATGGCATGTCAACTGCTTGTGGATTCAACATGGATGGGTCGGGTGCTGGTGGCTCGAGCAGTGGTAATGGCCAATATTGA 441 0.4422 MEHGCPSFNNNRSAHLSLQDLPPTTNEELCLPIRNLTRIMRHALPSYAKISQDAKTTTQLCVSDFTGIIITEVVEKCNEESRKIISGEDLIWTMGRLGFEDYVGPLSLLLQNYRNHEAQFNGMSTACGFNMDGSGAGGSSSGNGQY 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g01003 146 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 26 120 IPR027113 GO:0001228|GO:0006355|GO:0016602
Mepo4g01003 146 SUPERFAMILY Histone-fold 27 123 IPR009072 GO:0046982
Mepo4g01003 146 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 31 93 IPR003958 -
Mepo4g01003 146 Gene3D Histone, subunit A 23 136 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g01003 Mepo-Chr4 13293374 13295163 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g01003 24 119 CCAAT-HAP3 Transcription Factor Family AT4G14540 53.125 6.74e-33 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Mepo4g01003 CBFD_NFYB_HMF 4.2e-14 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g01003 K08065 - sly:101258181 109.768