Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00982 ATGGAACATAGTATCCTATGTAAAACCACTGTCCATGAAAGTGTTACTAAGATGAAGTACACAAAACCAAAAAAACACACCAACAACAACAAAAAAAAATCTATTCAAATACCAAGAGTGATTCGAGTAACATATACTGATCCAGATGCTACTGATTCATCAAGCGATGAAGAATCAAATTTTATCATTCCTCGAAGAAGAATAAAGCGCTATGTCAACCAAATGGAAATAGAAACCGTCGCCTCAACGAAGGTTTCTGGTAATAAGAGAAAGTCTTTCAGAAGAATGAAACCTTCGCAGAGACCTGCGAAGGTTTCAGCTATCACTAGAGATGAAAGAAAGTATCGCGGTGTTCGGATGAGACCTTGGGGAAAATGGGCTGCTGAGATTAGAGATCCGGGGTCTAAAGTCCGGTTATGGTTGGGAACTTTCAGCACTGCTGAAGAAGCTGCTATGGTTTATGACGCTGCCGCAATAAAGTTTCGCGGTAAAGACGCTGTTTTAAACTTTCAACCACCGTCGCCGGAGAATGTAGTAAAAGATGAAGTTGTTAAAGGAAAAATGAAGGTTTCCGCCGTTAAAACGGAGGTTTCAGGCTCCGGTGAAGATTCCGGTGATGAGTTTATCAATCTATCTTCTCCTACTTCTGTTCTCCGGTTCAGAAATGAGGAAATTGGTGAACCGTTGAAAATGGTTGAAGTTGAACCGGTTAATGAAGATAAACCGGTTAATGAAGATGAACCGGTTGAACCGTTTGGTGAGTGTGAAGGTGAAACGAGGTATTTCGACGAAACTAATGATATTTTCCGACAAGACATGGATGATGTGTTCAATTTTCCAACAACATGTGATTATTCACTTATGTTTGATGAAGATCCTATGTTAATTTTTGATGAAACGACAACGGTTTTGGTTGATGAGTGTCGTTTAAGTGATCACGTGGAATTTGATAAAACGCACTTACCTTCATCATCATCATCATCATCAACTTTATGCCAACAACAACAAGAGGATGATTTTCTTGAAGACATTTTGTTCGATTTAGAACCTCTTGTTATGCTTTGA 1065 0.3915 MEHSILCKTTVHESVTKMKYTKPKKHTNNNKKKSIQIPRVIRVTYTDPDATDSSSDEESNFIIPRRRIKRYVNQMEIETVASTKVSGNKRKSFRRMKPSQRPAKVSAITRDERKYRGVRMRPWGKWAAEIRDPGSKVRLWLGTFSTAEEAAMVYDAAAIKFRGKDAVLNFQPPSPENVVKDEVVKGKMKVSAVKTEVSGSGEDSGDEFINLSSPTSVLRFRNEEIGEPLKMVEVEPVNEDKPVNEDEPVEPFGECEGETRYFDETNDIFRQDMDDVFNFPTTCDYSLMFDEDPMLIFDETTTVLVDECRLSDHVEFDKTHLPSSSSSSSTLCQQQQEDDFLEDILFDLEPLVML 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00982 354 Gene3D AP2/ERF domain 113 172 IPR036955 GO:0003700|GO:0006355
Mepo4g00982 354 Pfam AP2 domain 114 163 IPR001471 GO:0003700|GO:0006355
Mepo4g00982 354 SUPERFAMILY DNA-binding domain 114 171 IPR016177 GO:0003677
Mepo4g00982 354 SMART rav1_2 114 177 IPR001471 GO:0003700|GO:0006355
Mepo4g00982 354 PRINTS Ethylene responsive element binding protein signature 115 126 IPR001471 GO:0003700|GO:0006355
Mepo4g00982 354 PRINTS Ethylene responsive element binding protein signature 137 153 IPR001471 GO:0003700|GO:0006355
Mepo4g00982 354 ProSiteProfiles AP2/ERF domain profile. 114 171 IPR001471 GO:0003700|GO:0006355
Mepo4g00982 354 MobiDBLite consensus disorder prediction 86 107 - -
Mepo4g00982 354 CDD AP2 114 171 IPR001471 GO:0003700|GO:0006355
Mepo4g00982 354 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 38 252 - -
Mepo4g00982 354 FunFam Ethylene-responsive transcription factor 2 113 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00982 Mepo-Chr4 13064326 13066086 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00982 7 278 AP2-EREBP Transcription Factor Family AT4G27950 42.182 7.98e-53 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo4g00982 AP2 5.5e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00982 - - psat:127091686 421.009