Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00967 ATGCAAAAAACGACCATGAAGAACATGAAACGACACTCATCGGAATCCTCTCTCCGACGAGTGGATTCTCCGGTTGGAGCCGTTACGAAGCTGGAGAATGTTCACCGGAGAAGATTGAAAATTCGGAGAATGAAGTATAGTTGTCAAGCAAAGATCCACGTCGGAAATGGCTCCGATAACGGTGGTCTGGAAACTAAGAATGCACGACGAGAGATTCATGAATCGGTTGAGATATCGTTGTCGTTAGCAACTTCGTCATCATCAGAGGAAGATGATCAGTCATCCAAGCAAAACGGAGAGGTGAAGCATTATCAACAACAACAACCACCTGTATCGTACGGTTCGGTGTCAACAATAGGTTGTAGGAAGGAAATGGAGGATGCGGTGAGTGTGGAGATAGGTTTTATGATGAAGGAGGGAGAGAAGTGTGATTTCTTCGGTGTTTATGATGGTCACGGTGGTGCTCAGGTGGCGGAGGCGTGTAGGGAGAGGTTATATAGGATTGTGGCGGAGGAGGTAGGGAAGGATGGGGAATTTGAGTGGGAGAGAGTGATGGAAGGGTGTTTTGATAAAATGGATAGGGAGGTGGCGGGTGATGCCGCGGTTAGGACTGTGGGGTCTACCGCAGTTGTGGCGGTTGTTGTTAAGGAGGCGATTGTTGTTGCGAATTGTGGTGATTCTAGAGCCGTTTTGGGAAGAGGTGGTGAAGCTTTGGATTTGTCAAGTGATCATAAGCCAAACAGGCCTGATGAGTTGCTGAGAATAGAAGAAGCTGGTGGAAGAGTCATAAACTGGAATGGCCACCGTGTTCTTGGTGTTCTTGCAACTTCACGATCTATAGGAGATCAATATCTTCGACCATATGTAATATCAAAACCTGAAGTCACTGTGACAAAGAGAACCAATGAAGATGAATTTCTCATACTAGCAAGTGATGGTTTGTGGGGTGTAATGTCTAGTGAAATTGCATGCCAAGTTGTAAGAAAATGTTTCAAAGGCCAAATTAGGAGAGTTTGTCAAGGGAATGGGAATCAAAGTAATCGTGCTGCTGAAGCTGCAACACTATTGTCTGAGATAGCATTGGCAAAGGGTAGCAGAGACAATACAAGTGTCATAGTTGTTGACCTAAGAGGAACAGTAAGATCTAGTTGA 1152 0.4523 MQKTTMKNMKRHSSESSLRRVDSPVGAVTKLENVHRRRLKIRRMKYSCQAKIHVGNGSDNGGLETKNARREIHESVEISLSLATSSSSEEDDQSSKQNGEVKHYQQQQPPVSYGSVSTIGCRKEMEDAVSVEIGFMMKEGEKCDFFGVYDGHGGAQVAEACRERLYRIVAEEVGKDGEFEWERVMEGCFDKMDREVAGDAAVRTVGSTAVVAVVVKEAIVVANCGDSRAVLGRGGEALDLSSDHKPNRPDELLRIEEAGGRVINWNGHRVLGVLATSRSIGDQYLRPYVISKPEVTVTKRTNEDEFLILASDGLWGVMSSEIACQVVRKCFKGQIRRVCQGNGNQSNRAAEAATLLSEIALAKGSRDNTSVIVVDLRGTVRSS 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00967 383 PANTHER PROTEIN PHOSPHATASE 93 376 IPR015655 GO:0004722|GO:0006470
Mepo4g00967 383 MobiDBLite consensus disorder prediction 99 115 - -
Mepo4g00967 383 MobiDBLite consensus disorder prediction 1 22 - -
Mepo4g00967 383 ProSiteProfiles PPM-type phosphatase domain profile. 112 376 IPR001932 -
Mepo4g00967 383 MobiDBLite consensus disorder prediction 81 116 - -
Mepo4g00967 383 Pfam Protein phosphatase 2C 113 369 IPR001932 -
Mepo4g00967 383 SUPERFAMILY PP2C-like 101 377 IPR036457 -
Mepo4g00967 383 ProSitePatterns PPM-type phosphatase domain signature. 145 153 IPR000222 GO:0043169
Mepo4g00967 383 Gene3D - 104 381 IPR036457 -
Mepo4g00967 383 SMART PP2C_4 108 374 IPR001932 -
Mepo4g00967 383 FunFam Protein phosphatase 2C 51 105 383 - -
Mepo4g00967 383 CDD PP2Cc 111 376 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00967 Mepo-Chr4 12855609 12859144 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00967 66 377 PP2C-type Phosphatase Gene Family AT2G29380 48.795 1.47e-91 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00967 K14497 - gmx:100807235 468.388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g00967 4 12855609 12859144 Mepo4g00967 4 12855609 12859144 ECH