Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00964 ATGGTAAACTTTACAAATATTTTGGTGGTCATGATTCTCATCTTGCTTTGTAATTGCAACTTAGGTATATGCCAAGTTAATGGTTGTAGTCGGAAGGATTTTAGGTGCGGAGATCACGGCCCGCCAATCCGATTTCCCTTCCGACTTAACAACAGAGAAACAGGATATGGATGCAGTTATAATGGCTTTAATCTTAGTTGTTCAGACACAAACAAAACTCTACTTGAGCTTCATCCACATTCTGGTCCAATTAAACTCGAAGTCACAGCAATAGATTATCAATTACAACAATTACAGGTATCTGACCCTGAAAATTGTATTCCAAGACAAGTTTTAAAGCTCCTTAAATCACAAATTTCTCCTTTTCAATTATACCAGGATCCGTACGACACATATAACTACAGTTTCCTGGATTGTAGTTCATTATCCTGCCCGGTTGTTGTTGATTCTAGTGATACACTCCTTGATTCGGGTTTGGACCCAATACTCTGCACCAAGACTTTAGATATTCTTTCTTCATCGTGGTACCTGTGGCATACGCTGCAATTTGAGAATGTTTTGATTCTGACATGGTCAAAACCCAATTGTAGCAAGTGTGAAATAGAAGGGAAGATGTGTAAACTGAAAAACAATGGAACTGAAGACGAGATAGAATGTTTTGATCGTCATCACAAACCAACTAAGAAGATACTTCTATATGCCACAGTTGTGTTCGTAGGTTCAGTTATGATAACACTGATTATTGCAGCCTGTTTCCATCTCTATAGCTATTTCAAACTGAAAGGTGAAGATGAGACTAGAATCGAAAAGTTCTTAGAGGACTACAGGACACTCAACCCTGCAAGATTCTCTTATGCTGATATAAAGAGGATTACAAAAAGTTTTAGGGAAGAGTTAGGTGAAGGAGTTCATGGTGCAGTTTTCAAAGGTAAATTATCTAATGAAATTCTAGTTGCTGTAAAGATGCTTAAAAACACCGAGGGCGATGGAAAAGAGTTCATTAACGAAGTGAAAGCTATGGGAAAAATTCATCACATCAACGTTGTTCGCTTGGTTGGATTTTGTGCTGATGGATCCTATCGTGCTCTTGTTTATAATTTCTTTCCAAACGGTTCGTTACAAAACTTCATAACCCGACCTGATGATATGGACCGTTTTCTCGGATGGGAGAAGCAACAACAAATTGCTCTCGGCATAGCCAAAGGTATTGAGTATCTTCACATGAGTTGTGATCAGCAAATTCTTCACTTCGATATTAATCCCCATAACGTGTTATTAGACGACAAGTTTGTTCCAAAAATTACAGATTTTGGCTTGGCAAAATTGTGTTCTAAAAATCAAAGCAAAGTGTCAGTAACTGCTGCAAGAGGGACTTTAGGTTACATTGCACCTGAAGTGTTTTCGAGGAACTTTGGAAATGTATCGTATAAAGCTGACATATATAGTTATGGGATGTTACTACTTGAAATGGTTGGAGGAAGAAAAAATATAGGTCAATTGTCTGAGGAAAATTTTCAAGTTCTATATCCAGAATGGATTCATAATCTACTTGATGGGCGCGATATGCATGTGACTATTGAAGGAGCAGAAGATGATAGAATTTTAAAGAAACTCGCAATTGTAGGACTGTGGTGCATTCAGTGGCATCCAATAAATCGTCCATCTATAAAAGTTGTGCTCCAAATGTTAGAGGCTCTAGAAGAAGAAAACTTGATCGTTCCCCCAAACCCTTTTAATTCGACGACGTCCAGAGTTGTTGAAACCAAAACAAAATTTTCAACCTTAGAGTTGGAAGCTATACATGAATGA 1809 0.3776 MVNFTNILVVMILILLCNCNLGICQVNGCSRKDFRCGDHGPPIRFPFRLNNRETGYGCSYNGFNLSCSDTNKTLLELHPHSGPIKLEVTAIDYQLQQLQVSDPENCIPRQVLKLLKSQISPFQLYQDPYDTYNYSFLDCSSLSCPVVVDSSDTLLDSGLDPILCTKTLDILSSSWYLWHTLQFENVLILTWSKPNCSKCEIEGKMCKLKNNGTEDEIECFDRHHKPTKKILLYATVVFVGSVMITLIIAACFHLYSYFKLKGEDETRIEKFLEDYRTLNPARFSYADIKRITKSFREELGEGVHGAVFKGKLSNEILVAVKMLKNTEGDGKEFINEVKAMGKIHHINVVRLVGFCADGSYRALVYNFFPNGSLQNFITRPDDMDRFLGWEKQQQIALGIAKGIEYLHMSCDQQILHFDINPHNVLLDDKFVPKITDFGLAKLCSKNQSKVSVTAARGTLGYIAPEVFSRNFGNVSYKADIYSYGMLLLEMVGGRKNIGQLSEENFQVLYPEWIHNLLDGRDMHVTIEGAEDDRILKKLAIVGLWCIQWHPINRPSIKVVLQMLEALEEENLIVPPNPFNSTTSRVVETKTKFSTLELEAIHE 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00964 602 Gene3D Phosphorylase Kinase; domain 1 268 367 - -
Mepo4g00964 602 Pfam Wall-associated receptor kinase galacturonan-binding 29 102 IPR025287 GO:0030247
Mepo4g00964 602 ProSitePatterns Protein kinases ATP-binding region signature. 299 321 IPR017441 GO:0005524
Mepo4g00964 602 Pfam Protein kinase domain 296 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g00964 602 ProSiteProfiles Protein kinase domain profile. 293 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g00964 602 FunFam PR5-like receptor kinase 368 574 - -
Mepo4g00964 602 FunFam serine/threonine-protein kinase PBS1-like 261 367 - -
Mepo4g00964 602 PANTHER RUST RESISTANCE KINASE LR10-RELATED 264 581 IPR045874 GO:0004672
Mepo4g00964 602 SUPERFAMILY Protein kinase-like (PK-like) 273 564 IPR011009 -
Mepo4g00964 602 Gene3D Transferase(Phosphotransferase) domain 1 368 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00964 Mepo-Chr4 12747422 12749738 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00964 251 577 Receptor kinase-like Gene Family AT1G66980 47.463 4.48e-94 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mepo4g00964 Pkinase 1.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00964 - - aip:107619931 672.159