Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00963 ATGATGAAAAAACAAGCTCCGTGTTCTAGTTCATCATATGTACAAACACTAGTATTAGTATTTGCTTCAATTCATCTCATTTCTCATCAAAATTGTCTAGCTAAGCATCACCAACCATGCCCAACGTCATCATGCGGCAAAGTCACCAACATAACATACCCATTTCGTCTCAAAACTGATCCAAAACACTGCGGGGACAAAAGGTACGAATTAGATTGCAACGAAAATGGTCCATTAGTAACCATATCCTCTGGGGAAAACTCTTTTGAACAATTCTCCAGGAAATACTATGTACAACACATAGATTACAAGATATTTACAATTTCATTAAGTGACGCAGGTGCAGTGGAAGATGCTAATTGCTCTTTCATCCCGCGGTACTTTCTATATAAACAAAGTCTCAGTCATTCCTATTTCAACAAAGCGGATTTTGTATTTGAGCCGTACTTTTTGCGCCCTGAGGATCAAAGGCAGATAGCATATTTCAATTGTTCTAATCCAATAAAAGATCCAAGGTACGTTAAGGTGGATATGAGTCGTTGTAGCAGACATGGGAATAGTAGTACTAATCATGTGTATGCGGTTTTGCAACCATCAGTGTACAGTCTAGGGGATATTGAGGTTGGGTGTGATTTTATGGTGGCTACGTTGGCTAAGGCACAATCAGAGATTGTGAAAGAGAATGTTTCTTATGATGAGATTCATGGGATAATAATTCATGGATTTGAGCTTTCATGGTTGCCTATGATTTGTGAAGATCGATGTGGAAAGGGGACAAGTTGTGAGGTTGTTGATGAAGGTAGTGGAGAAGTTAAATGTGATAAGCGATTCTGTCATTATGTATACCAAACAACCGATAAGTGTGGACTTCAGGACCAGATATTTGGTTATACTCGTGGTTATCTTAGAGGCATTTTTATCGGACTTAGAAGTAGAATCACATTTAGCACAAGACAATTGGACAATCCTGTTGGACTAGAATACTTTGATCTAGGAATATACATAGGAAGAAATGTTATACCTTTATTCTTAGCAACCAGATTTATATTTGGAGTTATAGCTCTACTTGTGCTATTTATCTACAAATGGAAAAGAAGACATTTATCGATGTATGACAACATTGAAAACTTTTTGATAGAGAGCAATCTAAACCCTATTAGGTATGAATACAAAGAAATCAAGAAGATGACTGCAAGTTTAAGAGTGAAATTAGGTCAAGGAGGTTTTGGTGCTGTCTACAAAGGAAAGCTAAGAAGTGGACCGGATGTCGCAATTAAGATGTTGACAAAATCCAATGTTAATAATGGACAAGATTTTATTAACGAAGTTGCGACCATTGGAAGAATACATCATGTTAATGTGGTCCGTCTTGTTGGATATTGTGTTGAAGGAAAAAAGAGTGCACTGGTTTACGAGTTCATGCCAAATGGATCGTTGGATAAATACATTTTCCCTAAAGAAGGAACTAACGCTTTGAGTTATGAAAAAACATATGAAATATCTCTCGGAATAGCTCGTGGGATAGAATATCTGCATCAAGGATGTGATATGCAAATTCTACATTTTGATATCAAGCCTCATAATATTCTTCTAGATGAAGACTTTGTTCCAAAGGTTTCGGATTTTGGACTTGCAAAGCTATATCCCGTGAACGATAGCATTGTTACCTTAACTGCAGCAAGAGGAACTTTGGGTTACATGGCTCCTGAATTGTTCTACAAAAATATTGGTGGAGTGTCTTACAAGGCTGATGTATATAGCTTTGGAATGCTTTTGATGGAAATGGCAGGTAAAAGGAAGAATTCGAATCCTAATGCAGAGCATTCGAGTCAGCATTACTTTCCGTTTTGGATCTACGATCAATTTAAAGAAGAGAGAGATATTGAAATAATGGAAGATGTCTCTGAAGAGGAAATGGCAGTAGCTAAAAAGATGTTCATGGTTGCATTTTGGTGTATTCAGTTGAAACCGAGTGATCGTCCTTCAATGAACAAAGTAGTTGAGATGCTTGAAGGGAAAATTGAAAGCCTTGAATTGCCCCCAAGACCTTCTTTTTATCCAAATGAAAATTATAAATATCATGATGAAATCAACTCTGACCGAACATCAGGGGGTGATTCCACAAGTTATTCATCAGATACTTGCTCTTGA 2151 0.371 MMKKQAPCSSSSYVQTLVLVFASIHLISHQNCLAKHHQPCPTSSCGKVTNITYPFRLKTDPKHCGDKRYELDCNENGPLVTISSGENSFEQFSRKYYVQHIDYKIFTISLSDAGAVEDANCSFIPRYFLYKQSLSHSYFNKADFVFEPYFLRPEDQRQIAYFNCSNPIKDPRYVKVDMSRCSRHGNSSTNHVYAVLQPSVYSLGDIEVGCDFMVATLAKAQSEIVKENVSYDEIHGIIIHGFELSWLPMICEDRCGKGTSCEVVDEGSGEVKCDKRFCHYVYQTTDKCGLQDQIFGYTRGYLRGIFIGLRSRITFSTRQLDNPVGLEYFDLGIYIGRNVIPLFLATRFIFGVIALLVLFIYKWKRRHLSMYDNIENFLIESNLNPIRYEYKEIKKMTASLRVKLGQGGFGAVYKGKLRSGPDVAIKMLTKSNVNNGQDFINEVATIGRIHHVNVVRLVGYCVEGKKSALVYEFMPNGSLDKYIFPKEGTNALSYEKTYEISLGIARGIEYLHQGCDMQILHFDIKPHNILLDEDFVPKVSDFGLAKLYPVNDSIVTLTAARGTLGYMAPELFYKNIGGVSYKADVYSFGMLLMEMAGKRKNSNPNAEHSSQHYFPFWIYDQFKEERDIEIMEDVSEEEMAVAKKMFMVAFWCIQLKPSDRPSMNKVVEMLEGKIESLELPPRPSFYPNENYKYHDEINSDRTSGGDSTSYSSDTCS 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00963 716 FunFam PR5-like receptor kinase 474 681 - -
Mepo4g00963 716 Gene3D Phosphorylase Kinase; domain 1 375 473 - -
Mepo4g00963 716 PANTHER RUST RESISTANCE KINASE LR10-RELATED 371 690 IPR045874 GO:0004672
Mepo4g00963 716 ProSitePatterns Serine/Threonine protein kinases active-site signature. 519 531 IPR008271 GO:0004672|GO:0006468
Mepo4g00963 716 ProSiteProfiles Protein kinase domain profile. 398 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g00963 716 SMART serkin_6 398 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g00963 716 Pfam Wall-associated receptor kinase galacturonan-binding 40 112 IPR025287 GO:0030247
Mepo4g00963 716 MobiDBLite consensus disorder prediction 702 716 - -
Mepo4g00963 716 Pfam Protein kinase domain 402 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g00963 716 CDD STKc_IRAK 404 672 - -
Mepo4g00963 716 Gene3D Transferase(Phosphotransferase) domain 1 474 678 - -
Mepo4g00963 716 MobiDBLite consensus disorder prediction 680 716 - -
Mepo4g00963 716 ProSitePatterns Protein kinases ATP-binding region signature. 404 426 IPR017441 GO:0005524
Mepo4g00963 716 FunFam serine/threonine-protein kinase PBS1-like 369 473 - -
Mepo4g00963 716 SUPERFAMILY Protein kinase-like (PK-like) 388 671 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00963 Mepo-Chr4 12741680 12745163 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00963 41 686 Receptor kinase-like Gene Family AT5G38260 34.351 4.49e-104 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mepo4g00963 Pkinase 6.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00963 - - lja:Lj0g3v0275229.4 944.495