Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00961 ATGGCCAATTTTCACAATTTCGTTTTTCTACTAACTATGTTCTTTCTTCTATTAACAGAACCAGTAACATCCAAAAATCCATGCACTGCAAAATGTGGAAAAGTTCGAATTCAATTTCCATTTCATCTCAAAAACAACATCATGAATCACACCAATCCTAAAGGTTTAGAATTATCATGTACAGACAAAGGTGAAACCATGTTAGAATTTCCCACAATTCCACTACAACTTTTCATAAAACGAATAGACTACAAAGCTCAAAAGTTCCAAATCTATGACCCAAAAAACTGTCTTGCAAGACGATTATTAAAACTAGGAAACTTATCAGTTTCGCCGTTTCAGTTTCAATTGCAGGAGTCTAATACACATACACAGAGTAGTATTTCTTTCTTTCATTGTGATTTGAACAAGGAGTGTTCGATTCTGCTACGTGAATCTAGTCGTTATTTTATTGATCCTGAGTTGGTTTCATGTAGAAAAGTTAGTGATGTTTTGAATGTGGGCTGGACGATTGAGGAATGGGAAGATGATGGTTCAGAGAGTTTGATAATGGAATGGTCTAAACCGAATTGTAGCGTTTGTGAAGTTCAAGGGCAGAAATGTAGATGGAAGGATCATGGTGGCAGAAATGGTGAAGTTGAATGTTTTGTTTGTAAATCAGATGGGATTGCAAGATCTACTGTTCTTCTAATTACTGCTGGGGTTATAGCTGGTTCCATGATTTTGCTGCTATTGGCAAATGGATTTCTTCGCATTTATCGTTATTTTAAGATGAAAGGAGATGACATAACAAGGATAGAAAACTTCTTGGAGGATTATAGAGCAATGAAACCAACAAGATTTACTTATGCTGACATTAAGAGAATAACAAATGGTTTTAAGGAAAATTTAGGAGAAGGTGCTCATGGAGCCGTATTCAAAGGCATGCTCTCCCAAGAAATTTTGGTTGCTGTGAAGGTACTCAATGAAACACAAGGAGATGGCAACGATTTCATCAATGAAGTCGGAACTATGGGAAAAATTCATCATGTCAATGTTGTTCGCTTGCTCGGATTCTGTGCTGATGGATTCCACCGTGCTCTTGTCTATGATTTCTTTCCAAACGGGTCGTTGCAAAAATTCTTGGCGCCACTGGAGAACAGTGATGATTTTCTTGGTTGGGAAAAGTTGCAACGAATTGCTCTTGGTGTTGCTAGAGGGGTTGAGTATCTTCATATTGGTTGTGATCATAGAATACTTCACTTTGATATCAATCCACACAATGTGTTAATAGATGATAATTTGAGTCCTAAAATCACTGACTTTGGACTTGCTAAACTGTGTCCCAAAAATCAAAGTACAGTGTCTATGACCGCAGCTAGAGGAACATTGGGCTACATTGCACCTGAAGTTTTCTCGAGAAACTTCGGAAATGTTTCTTACAAGTCTGATATTTATAGCTACGGAATGTTGTTGCTCGAGATGGTTGGAGGAAGAAAGAATACTAATGTGCTGGGCGAGAAAACATTCCAAGTTTTGTACCCAGAGTGGATCCATAATCTTATTGAAGACAAAGATGTACGAGTTAATATTGACAATGAGGGAGATGTTAGAATTGCAAAGAAACTTGCGCTGGTCGGACTTTGGTGTATTCAATGGAATCCAGTGGATCGGCCATCCATGAAAACTGTGGTACAGATGCTTGAAGGTGATGGAGAAAATTTAATGGCACCCCCAACTCCTTTTGACTCTATTGGTGCTAATAGAACAAATCAAGTTATTCCACCTAGACATCTAAATTTTGAGTTAGAAGTTATTCCTGAAATAGTCTAA 1812 0.3764 MANFHNFVFLLTMFFLLLTEPVTSKNPCTAKCGKVRIQFPFHLKNNIMNHTNPKGLELSCTDKGETMLEFPTIPLQLFIKRIDYKAQKFQIYDPKNCLARRLLKLGNLSVSPFQFQLQESNTHTQSSISFFHCDLNKECSILLRESSRYFIDPELVSCRKVSDVLNVGWTIEEWEDDGSESLIMEWSKPNCSVCEVQGQKCRWKDHGGRNGEVECFVCKSDGIARSTVLLITAGVIAGSMILLLLANGFLRIYRYFKMKGDDITRIENFLEDYRAMKPTRFTYADIKRITNGFKENLGEGAHGAVFKGMLSQEILVAVKVLNETQGDGNDFINEVGTMGKIHHVNVVRLLGFCADGFHRALVYDFFPNGSLQKFLAPLENSDDFLGWEKLQRIALGVARGVEYLHIGCDHRILHFDINPHNVLIDDNLSPKITDFGLAKLCPKNQSTVSMTAARGTLGYIAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNTNVLGEKTFQVLYPEWIHNLIEDKDVRVNIDNEGDVRIAKKLALVGLWCIQWNPVDRPSMKTVVQMLEGDGENLMAPPTPFDSIGANRTNQVIPPRHLNFELEVIPEIV 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00961 603 Pfam Protein kinase domain 294 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g00961 603 SUPERFAMILY Protein kinase-like (PK-like) 272 562 IPR011009 -
Mepo4g00961 603 ProSiteProfiles Protein kinase domain profile. 291 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g00961 603 PANTHER RUST RESISTANCE KINASE LR10-RELATED 264 580 IPR045874 GO:0004672
Mepo4g00961 603 Gene3D Transferase(Phosphotransferase) domain 1 366 569 - -
Mepo4g00961 603 Pfam Wall-associated receptor kinase galacturonan-binding 28 93 IPR025287 GO:0030247
Mepo4g00961 603 FunFam PR5-like receptor kinase 366 571 - -
Mepo4g00961 603 ProSitePatterns Protein kinases ATP-binding region signature. 297 319 IPR017441 GO:0005524
Mepo4g00961 603 Gene3D Phosphorylase Kinase; domain 1 266 365 - -
Mepo4g00961 603 FunFam S-receptor-like serine/threonine-protein kinase 263 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00961 Mepo-Chr4 12735037 12737292 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00961 257 574 Receptor kinase-like Gene Family AT1G66910 50.769 5.98e-105 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mepo4g00961 Pkinase 1.7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00961 - - gmx:100819302 847.81