Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00959 ATGTATGAAGATATTGAAGTTTTTCTTCAAGGGAGTAATCTGATGCCAATTAGGTATTCATACAAAGAAATAAAGAAGATGACTCGAAGTTTTATAGACAAGTTGGGTGAAGGAGGCTTTGGAGCTGTTTTTAAAGGAAAGCTATGCAGCGGGCCATTTGTGGCCATAAAGATGTTGGGTAAATCTAAGGGCAATGGACAAGATTTCATTAGTGAAGTCGCAACCATAGGAAGAATACATCATACCAATGTGGTTCGACTTATTGGATTTTGTGTTGAGGGATCAAAGCGTGCTCTTGTTTATGAATTCATGTCCAATGGTTCTCTTGATAAATATATTTCTTCTAGTGAGGATGCTATCTCTCTAACTTATAAGCAAATGTATGACATATCCCTTGGAGTGGCTCGTGGTATTGCTTATTTGCATCAAGGATGTGACATGCAAATTCTGCATTTTGACATCAAGCCTCATAACATCCTTCTTGATGAGAACTTTATCCCCAAAGTTTCAGACTTTGGTCTTGCAAAGCTTTATCCAAATGACATTAGCATTGTCACATTAACTGCAGCAAGGGGAACAATTGGATACATGGCTCCTGAATTGTTCTACAAAAATATTGGAGGAGTATCCCACAAGGCTGATGTGTACAGCTTTGGAATGCTTTTGATGGAAATGGCAAGTAAGAAAAGAAATTTAAACCCACATGCCGATCGTTCAAGTCAAATTTTCTTTCCCATTTGGATTTATAATCAATTGATTGAAGAAAAGGAGATAGAAATGGATGAAATTACATATGAGGAAAATAATAATGTGAAGAAGATGTTCATAATTGCATTATGGTGTATACAATTGAAACCATGTGATCGTCCTTCAATGAACAAAGTGATAGAGATGCTCGAAGGAGATATTGAGAATGTTGAAATGCCTCCAAAGCCCTCTTTGTATCCAAATGAAATGATTGAGGAAGACCTTGACGTCAACTCTAGTGAAACTGAATCAGAAAATGATGGCTCTACTAGTTTTATCGAAGAATTAATACAAAGTAGTCTCTATTGA 1056 0.3636 MYEDIEVFLQGSNLMPIRYSYKEIKKMTRSFIDKLGEGGFGAVFKGKLCSGPFVAIKMLGKSKGNGQDFISEVATIGRIHHTNVVRLIGFCVEGSKRALVYEFMSNGSLDKYISSSEDAISLTYKQMYDISLGVARGIAYLHQGCDMQILHFDIKPHNILLDENFIPKVSDFGLAKLYPNDISIVTLTAARGTIGYMAPELFYKNIGGVSHKADVYSFGMLLMEMASKKRNLNPHADRSSQIFFPIWIYNQLIEEKEIEMDEITYEENNNVKKMFIIALWCIQLKPCDRPSMNKVIEMLEGDIENVEMPPKPSLYPNEMIEEDLDVNSSETESENDGSTSFIEELIQSSLY 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00959 351 SMART serkin_6 29 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g00959 351 Gene3D Phosphorylase Kinase; domain 1 9 103 - -
Mepo4g00959 351 ProSitePatterns Protein kinases ATP-binding region signature. 35 57 IPR017441 GO:0005524
Mepo4g00959 351 ProSiteProfiles Protein kinase domain profile. 29 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g00959 351 SUPERFAMILY Protein kinase-like (PK-like) 14 300 IPR011009 -
Mepo4g00959 351 FunFam serine/threonine-protein kinase PBS1-like 3 103 - -
Mepo4g00959 351 Gene3D Transferase(Phosphotransferase) domain 1 104 309 - -
Mepo4g00959 351 PANTHER RUST RESISTANCE KINASE LR10-RELATED 4 324 IPR045874 GO:0004672
Mepo4g00959 351 ProSitePatterns Serine/Threonine protein kinases active-site signature. 149 161 IPR008271 GO:0004672|GO:0006468
Mepo4g00959 351 Pfam Protein kinase domain 32 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g00959 351 FunFam PR5-like receptor kinase 104 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00959 Mepo-Chr4 12693850 12695317 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00959 18 341 Receptor kinase-like Gene Family AT5G38280 50.453 1.53e-109 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mepo4g00959 Pkinase 8.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00959 - - tpra:123893228 573.933