Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00958 ATGAGATTTACGCTAGGCCTTGTAGTTTTCTTTGCGCTATTGATATATACATGTCGAAGAAGACATACCTCAATATACGAAAATATTGAAGTTTTTCTTCGTGGAAGTACCTTGATCCCAATCAGGTATTCATACAAAGATATAAAGAAGATGACTAGAAGTTTTAAGGTCAAGTTAGGTGAAGGAGGTTTTGGCTGTGTTTATAAAGGAAAGTTAATTAGTGGTCCATTTGTTGCCATAAAGATGTTGGGTAAGCCTAAGGGTAATGGACAAGATTTCATTAATGAGGTTGCAACTATAGGAAGAATACACCATGCAAATGTGGTGAGACTTATTGGATTTTGTGTTGAGAGATCAAAACGTGCTCTTGTTTATGAATTCATGCCCAACGGCTCTCTTGATAAATACATTTCCTCTAAAGATGATGTTATTAATCTAACTTATAAGAAAATGTATGAGATATCTCTTGGAGTAGCCCGTGGAATTGCTTATTTGCATCAAGGATGTGACATGCAAATCTTGCATTTTGATATAAAACCCCATAACATCCTTCTTGACGAGAACTTTATCCCTAAGGTTTCAGACTTTGGTCTTGCAAAGCTTTATCCTAATGACAATAGTATTGTAACTTTAACTGCAGCAAGAGGAACAATTGGTTATATGGCTCCTGAGTTGTTCTACAAAAATATAGGTGGAGTATCCTACAAGGCTGATGTTTATAGCTTTGGAATGCTTTTGATGGAAATGGCAAGTAAGCGAAGAAATTTAAATCCACATGCGGATCGTTCAAGCCAACGTTTCTTTCCCTATTGGATTTATAATCAATTGATTGAAGAAAAGGATATAGAAATGGATGAAATTACTGATGAGGAAAACAGTAATGTGAAGAAAATGTTCATAATTGCGTTATGGTGTATTCAATTAAAACCAAGTGATCGTCCTGCAATGAACAAAGTAATAGAGATGCTCGAAGGAAATATTGAGAATATTGAAATGCCTCCAAAACCTTCATTCTGTCCAAATGAAATTATTCAGGAAGACCTAGAAGTCGACTCTAATGAAATTGAATCAGACTCAGTAAGTTTTATTGAGGAAGATACAACAGAGCCCTTATTGATGAATTCTGCTTGA 1131 0.351 MRFTLGLVVFFALLIYTCRRRHTSIYENIEVFLRGSTLIPIRYSYKDIKKMTRSFKVKLGEGGFGCVYKGKLISGPFVAIKMLGKPKGNGQDFINEVATIGRIHHANVVRLIGFCVERSKRALVYEFMPNGSLDKYISSKDDVINLTYKKMYEISLGVARGIAYLHQGCDMQILHFDIKPHNILLDENFIPKVSDFGLAKLYPNDNSIVTLTAARGTIGYMAPELFYKNIGGVSYKADVYSFGMLLMEMASKRRNLNPHADRSSQRFFPYWIYNQLIEEKDIEMDEITDEENSNVKKMFIIALWCIQLKPSDRPAMNKVIEMLEGNIENIEMPPKPSFCPNEIIQEDLEVDSNEIESDSVSFIEEDTTEPLLMNSA 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00958 376 PANTHER RUST RESISTANCE KINASE LR10-RELATED 26 344 IPR045874 GO:0004672
Mepo4g00958 376 FunFam PR5-like receptor kinase 128 335 - -
Mepo4g00958 376 Gene3D Transferase(Phosphotransferase) domain 1 128 333 - -
Mepo4g00958 376 Gene3D Phosphorylase Kinase; domain 1 36 127 - -
Mepo4g00958 376 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Mepo4g00958 376 Pfam Protein kinase domain 56 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g00958 376 SMART serkin_6 53 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g00958 376 ProSiteProfiles Protein kinase domain profile. 53 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g00958 376 FunFam serine/threonine-protein kinase PBS1-like 26 127 - -
Mepo4g00958 376 SUPERFAMILY Protein kinase-like (PK-like) 38 324 IPR011009 -
Mepo4g00958 376 ProSitePatterns Protein kinases ATP-binding region signature. 59 81 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00958 Mepo-Chr4 12680786 12681916 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00958 42 357 Receptor kinase-like Gene Family AT5G38280 51.703 1.81e-111 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mepo4g00958 Pkinase 1.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00958 - - tpra:123893228 649.818