Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00957 ATGGATCTGGGTTGGATTCCACAATTCGATGAATTTACCAATATTAGTTTCTTTGATTGTTCTTCACTTGGACGACGCTATCTAAGAAAGGACAGCCAAACGTATGGAGATGAGCAGCAGGACCTGATTTCTTGTCCAATTTATATGGCAGCATTTGAGGACGATATGGTTGAATCGAACCTTGTATTCTGCACCAAATTGTCTCAACGAGTTTTACCCCTTATTCGTTATTTTCCGGTAGAATATGATTATTATGGGTATACGATACGGCAAACCTCAATCTCATTATCATGGTCGGAAACAAATTTTGACAAAGGTTGCTTTAAATGCAAGAACAAATCAAAGAAGATTATTTTATCCTCTGCAGGTGCAATCATTGGCTCAACTGTGCTTGTTCTTATATTTGGTTTTATATTTAAAATATATCGCTATTTTAAGATGAAAAGCGAAGACCAAACAAGAATTGAAAACTTTTTGAAGGATTATAAGGCTTTAAAGCCAACTAGGTTCTCTTATGCAGACTTAAAGAGAATTACAAATAAATTTAAAGATAAGATAGGCGAAGGGGCTCATGGAGCTGTTTATAAAGGTAAACTATTGAACCAAATTATGGTAGCCGTGAAGATTCTTAATAATGCTGAGGGAGATGGGAAGGAATTCATAAATGAAGTGGGAACCATGGGAAAAATTCACCATCTCAATGTCGTTCGTTTGCTTGGCTTCTGTGCAGATGGTTTTCGTCGTGCTTTAGTCTATGATTTTTTTCCAAATGGTTCGTTGCAGAAATTCATTTCTCCCCCGATTAACAAAGATGATTTCCTTGGATGGGATAAGTTGCAACAAATTGCTCTAGGCATAGCAAATGGCATTGAGTATCTCCACCAAGGTTGTGATCAAAGAATTCTACACTTTGACATCAACCCTCATAATGTCTTGCTAGATGACAATTTCACTCCCAAAATCACAGATTTTGGATTGGCTAAGATGTGTTCGAAAAATCAAAGTATCGTATCCATGACTGCAGCTAAGGGAACATTAGGCTACATGGCACCTGAAGTTTTTTCAAGAAACTTTGGGAATGTTTCTTATAAGTCCGATATATACAGTTATGGTATGTTATTGCTGGAGATGGTTGGAGGAAGAAAGAATACAAAAACAATCAGTGGTGAAGAAAATATACAAGTTGAGTATCCAGACTGGATCCACAAATTGCTTGAAGGAGGAGATATACATATCCCTATTGATGAAGAGGGAGATTTTAGAATTCCAAAAAAATTGGCAACTGTGGGACTATGGTGTATCCAATGGCACCCTATGCATCGTCCGGCGATGAAATCTGTGATACAAATGCTTCAAGGAGAGGGGGACAAGTTAAAAGTACCAACTAATCCATTCGGACCAACAACTACAACTAATAAAAATGCTAATATTGTTGCAGAACGTATGAATTTGGAGCTGGAGGTGATTGAAGAATTAGAATAG 1482 0.3718 MDLGWIPQFDEFTNISFFDCSSLGRRYLRKDSQTYGDEQQDLISCPIYMAAFEDDMVESNLVFCTKLSQRVLPLIRYFPVEYDYYGYTIRQTSISLSWSETNFDKGCFKCKNKSKKIILSSAGAIIGSTVLVLIFGFIFKIYRYFKMKSEDQTRIENFLKDYKALKPTRFSYADLKRITNKFKDKIGEGAHGAVYKGKLLNQIMVAVKILNNAEGDGKEFINEVGTMGKIHHLNVVRLLGFCADGFRRALVYDFFPNGSLQKFISPPINKDDFLGWDKLQQIALGIANGIEYLHQGCDQRILHFDINPHNVLLDDNFTPKITDFGLAKMCSKNQSIVSMTAAKGTLGYMAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNTKTISGEENIQVEYPDWIHKLLEGGDIHIPIDEEGDFRIPKKLATVGLWCIQWHPMHRPAMKSVIQMLQGEGDKLKVPTNPFGPTTTTNKNANIVAERMNLELEVIEELE 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00957 493 ProSiteProfiles Protein kinase domain profile. 180 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g00957 493 SUPERFAMILY Protein kinase-like (PK-like) 161 451 IPR011009 -
Mepo4g00957 493 Gene3D Phosphorylase Kinase; domain 1 153 254 - -
Mepo4g00957 493 ProSitePatterns Protein kinases ATP-binding region signature. 186 208 IPR017441 GO:0005524
Mepo4g00957 493 Gene3D Transferase(Phosphotransferase) domain 1 255 462 - -
Mepo4g00957 493 Pfam Protein kinase domain 183 449 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g00957 493 FunFam serine/threonine-protein kinase PBS1-like 147 254 - -
Mepo4g00957 493 Coils Coil 472 492 - -
Mepo4g00957 493 FunFam PR5-like receptor kinase 255 463 - -
Mepo4g00957 493 PANTHER RUST RESISTANCE KINASE LR10-RELATED 151 470 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00957 Mepo-Chr4 12593958 12595562 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00957 114 475 Receptor kinase-like Gene Family AT1G66910 44.267 3.39e-105 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mepo4g00957 Pkinase 8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00957 - - tpra:123893290 674.47