Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00954 ATGTCAATGATAACAATACTTGCTTTGCTGATATTTCTAATGAACTTTGGAAATTGTCTGAGTAATTCATCCAATCGATGTCCCTTCAAGCTCGAATGTACACGTAACAAAAAGATTCTTGAACTTCCTTCTCAACCAGTCCCTGTGAAACTCATCCTCACTTACATTGATTATACACCCCCAAGAATAGATTTATCTGATCCTGGAAATTGTTTACCACAACTCCTACTTGACCACAACTTTTCATCAATTTTTCCTTTTAAGCCTTATCTCTCCGGAATTTCTGCATCTAGGAATATCAGTTTCTTCAATTGTTCTTCAGTTGCACAACTCAGAAGCTACTCTCAAGTGTACGAAGCACAAAATATGACATCATGTCCAATTTATGTTGCTGATTCGGATGGCGAAAGTATCATTGAATCAGATCTTGTATACTGCATCAAACTGTTTGATCGCGTTTCTTCATTTGACGCATCTTCCATTCAATCAAACATACTCTCATTGAAATGGTATGGAACAAATTTTGACTTAGGATGCTTGAAATGTGAACACAAACCAATGAAAAGGATTGCATTCATTATTTTATCCTCTGCAGGTGTAATAATCGGTTCAACTTTGCTAGTGCTTATGCTCGGTGCTATTATTCGAATTCATCGCCATTTCAAGATGAAAGGCGAAGATCATGAAAGAATCGAAAACTTTTTGAAGGATTATAAGGCTTTAAAGCCAACCAGATTCTCCTATGCTGACATAAAGAGAATTACAAACAAATTTAAGGATAAGATTGGAGAAGGAGCTCATGGAGCTGTTTACAAAGGTAAATTATCAAGTCAAATTCAAGTTGCTGTTAAGATGCTCAATATCGCAGAAGGAGATGGGAAGGAGTTCATAAATGAAGTGGGTACTATGGGCAAAATCCACCATCTCAATGTTGTCCGTTTGCTTGGCTTTTGTGCCGATGGATTTCATCGTGCTCTAGTCTATGACTTCTTCCCAAGTGGTTCGTTGCAGAAATTCATTTCTCCTCCTAGCAACAAAGATAGTTTCCTTGGATGGGACAAGTTGCAACAAATTGCTCTAGGCATAGCCAATGGAATCGAGTATCTTCACCAAGGTTGTGATCAAAGAATTCTTCACTTTGACATCAATCCTCATAACGTCTTGATCGATGACAATTTAACCCCAAAAATTACAGACTTCGGTTTGGCTAAGATGTGCTCGAAGAATCAAAGTACTATATCTATGACTGCGGCCAGAGGAACATTAGGATACATGGCACCCGAAGTTTTTTCTAGAAACTTTGGGAATGTCTCTTATAAGTCCGATATATATAGTTATGGCATGTTGTTGCTGGAGATGGTTGGGGGAAGGAAGAATACAAACACAACCACAAGTGAAGAAAGTCTACAAGTTTTATATCCAGATTGGATCCACAGTTTACTTGAAGGAGGAGACATACAAATCCCTATAGATGAAGATCAGGATGATTTCAGAATTGCAAAAAAAATGGCAATTGTGGGACTATGGTGCATTCAGTGGCAACCTATGCATCGTCCGTCCATGAAAACTGTGTTGCAAATGCTACAAGAAGAGGGAGACAAGCTAAAAGTTCCATGCAATCCTTTTGGGCCTTCAACTTCCACCAATACAACTGCTAGTATCGTTGCAAAACCTATGAGTTTGGAAGTGATTAAAGAGTTAGATTAG 1707 0.3825 MSMITILALLIFLMNFGNCLSNSSNRCPFKLECTRNKKILELPSQPVPVKLILTYIDYTPPRIDLSDPGNCLPQLLLDHNFSSIFPFKPYLSGISASRNISFFNCSSVAQLRSYSQVYEAQNMTSCPIYVADSDGESIIESDLVYCIKLFDRVSSFDASSIQSNILSLKWYGTNFDLGCLKCEHKPMKRIAFIILSSAGVIIGSTLLVLMLGAIIRIHRHFKMKGEDHERIENFLKDYKALKPTRFSYADIKRITNKFKDKIGEGAHGAVYKGKLSSQIQVAVKMLNIAEGDGKEFINEVGTMGKIHHLNVVRLLGFCADGFHRALVYDFFPSGSLQKFISPPSNKDSFLGWDKLQQIALGIANGIEYLHQGCDQRILHFDINPHNVLIDDNLTPKITDFGLAKMCSKNQSTISMTAARGTLGYMAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNTNTTTSEESLQVLYPDWIHSLLEGGDIQIPIDEDQDDFRIAKKMAIVGLWCIQWQPMHRPSMKTVLQMLQEEGDKLKVPCNPFGPSTSTNTTASIVAKPMSLEVIKELD 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00954 568 FunFam PR5-like receptor kinase 331 540 - -
Mepo4g00954 568 PANTHER RUST RESISTANCE KINASE LR10-RELATED 223 545 IPR045874 GO:0004672
Mepo4g00954 568 Pfam Protein kinase domain 259 526 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g00954 568 ProSiteProfiles Protein kinase domain profile. 256 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g00954 568 Gene3D Phosphorylase Kinase; domain 1 230 330 - -
Mepo4g00954 568 FunFam serine/threonine-protein kinase PBS1-like 224 330 - -
Mepo4g00954 568 ProSitePatterns Protein kinases ATP-binding region signature. 262 284 IPR017441 GO:0005524
Mepo4g00954 568 Gene3D Transferase(Phosphotransferase) domain 1 331 538 - -
Mepo4g00954 568 SUPERFAMILY Protein kinase-like (PK-like) 239 528 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00954 Mepo-Chr4 12550764 12552916 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00954 194 541 Receptor kinase-like Gene Family AT1G66910 46.927 1.91e-105 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mepo4g00954 Pkinase 3.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00954 - - mtr:25488766 737.258