Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00953 ATGGATTTAAAGCCAACCAAATTCTCCTATGATGACATAAAGAGAATTACAAACAAATTTAAGGATAAGATTAGAGAAGGAGCTCATGGAGTTGTCTACAAAGGTAAATTGTCGAGTCAAATTATGGTTGTTATTAAGATGCTCAATAACGCAGAGAGAGATGGGAAGGAGTTCAAAAATGAAGTGGGAACTATGGGCAAAATCCATCATCTCAATGTTGTTTGTGTGCTTGGCTTTTGCACCGATGGATTTCACCGTACTCTAGTCTATGACTTTTTCCCAAATGTATCATTGCAAAAATTCATTTCACCTCCTAGCAACAAAGATAATTTCCTTGGATGGGACAAGTTGCAACAAATTGGTCTAGGCATAGCCAATGGAATAGAGTATCTTCACCAAGGTTGTGATCAAAGAATTCTTCATTTTGACATCAATCCTTATAACGTCTCGGTCGATGAAAATTTCACCCCAAAAATTACAGATGTCGGTTTGGCTTAA 498 0.3695 MDLKPTKFSYDDIKRITNKFKDKIREGAHGVVYKGKLSSQIMVVIKMLNNAERDGKEFKNEVGTMGKIHHLNVVCVLGFCTDGFHRTLVYDFFPNVSLQKFISPPSNKDNFLGWDKLQQIGLGIANGIEYLHQGCDQRILHFDINPYNVSVDENFTPKITDVGLA 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00953 165 Gene3D Phosphorylase Kinase; domain 1 1 92 - -
Mepo4g00953 165 Gene3D Transferase(Phosphotransferase) domain 1 93 165 - -
Mepo4g00953 165 PANTHER RUST RESISTANCE KINASE LR10-RELATED 5 165 IPR045874 GO:0004672
Mepo4g00953 165 Pfam Protein tyrosine and serine/threonine kinase 20 165 IPR001245 GO:0004672|GO:0006468
Mepo4g00953 165 SMART tyrkin_6 18 164 IPR020635 GO:0004713|GO:0006468
Mepo4g00953 165 FunFam serine/threonine-protein kinase PBS1-like 1 92 - -
Mepo4g00953 165 SUPERFAMILY Protein kinase-like (PK-like) 5 165 IPR011009 -
Mepo4g00953 165 ProSiteProfiles Protein kinase domain profile. 18 165 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00953 Mepo-Chr4 12533977 12534474 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00953 3 165 Receptor kinase-like Gene Family AT1G66910 45.122 7.83e-47 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mepo4g00953 PK_Tyr_Ser-Thr 7.9e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00953 - - mtr:25482309 277.715