Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00952 ATGACTCGAAGTTTTAGAGACAAGTTGGGTGAAGGAGGCTTTGGAGCCGTTTTTAAAGGAAAGCTATGCAGCGGACCATTTGTGGCCATAAAGATATTGGGTAAATCTAAGGGCAATGGACAAGATTTCATTAGTGAAGTCGCAACCATAGGAAGAATACATCACACCAATGTGGTTCGACTTATTGGGTTCTGTGTTGAGGGATCAAAGCGTGCTCTTGTTTATGAATTCATGTCCAATGGTTCTCTTGATAAATATATTTCTTCTAGTGAGGATGCTATCTCTCTATCTTATAAGCAAATGTACGACATATCTCTTGGAGTGGCTCGTGGTATTGCTTATTTTCATCAAGGATGTGACATGCAAATTTTGCATTTTGACATTAAGCCCCATAACATTCTTCTTGATGAGAACTTTATTCCCAAAGTTTCAGACTTTGGTCTTGCAAAACTTTATCCAAATGACATTAGCATTGTCACTTTAACTGCAGCAAGAGGGACAATTGGATACATGGCTCCTGAATTATTCTACAAAAATATTGGAGGAGTATCCTACAAGGCCGATGTCTATAGCTTTGGAATGCTTTTGATGGAAATGGCAAGTAAGAGAAGAAATTTAAACCCACATGTGGATCGTTCAAGCCAACTTTTCTTTCCTTATTGGATTTATAATCAATTGATTGAAGAAAGAGAGATAGAAATGGATGAAATTACTGATGAGGAAAAAAGTAATGTGAAGAAAATGTTCTTAATTGCATTATGGTGTATACAGTTAAAACCAAGTGATCGTCCTGCAATGAACAAAGTAATAGAGATGCTCGAAGGAAATATTGAGAATATTAAAATGCCTCCAAAGCCTTCTTTTTGTCCAAATGAAGTGATTCAGCAGGAAGATCTCGAAGTCAACTCTAATGCAAATGAATCAGAACCTGTTACTGGTTCATTTAGTATCGAGGAAGATGCAACTATGAAGTGTACTAATCCAGTTCCAATAGCAAGCATAAGTTAA 1008 0.3671 MTRSFRDKLGEGGFGAVFKGKLCSGPFVAIKILGKSKGNGQDFISEVATIGRIHHTNVVRLIGFCVEGSKRALVYEFMSNGSLDKYISSSEDAISLSYKQMYDISLGVARGIAYFHQGCDMQILHFDIKPHNILLDENFIPKVSDFGLAKLYPNDISIVTLTAARGTIGYMAPELFYKNIGGVSYKADVYSFGMLLMEMASKRRNLNPHVDRSSQLFFPYWIYNQLIEEREIEMDEITDEEKSNVKKMFLIALWCIQLKPSDRPAMNKVIEMLEGNIENIKMPPKPSFCPNEVIQQEDLEVNSNANESEPVTGSFSIEEDATMKCTNPVPIASIS 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00952 335 Gene3D Phosphorylase Kinase; domain 1 9 78 - -
Mepo4g00952 335 SMART serkin_6 3 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g00952 335 ProSiteProfiles Protein kinase domain profile. 3 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g00952 335 ProSitePatterns Protein kinases ATP-binding region signature. 9 31 IPR017441 GO:0005524
Mepo4g00952 335 Pfam Protein kinase domain 7 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g00952 335 FunFam PR5-like receptor kinase 78 285 - -
Mepo4g00952 335 ProSitePatterns Serine/Threonine protein kinases active-site signature. 123 135 IPR008271 GO:0004672|GO:0006468
Mepo4g00952 335 Gene3D Transferase(Phosphotransferase) domain 1 79 284 - -
Mepo4g00952 335 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 295 IPR045874 GO:0004672
Mepo4g00952 335 SUPERFAMILY Protein kinase-like (PK-like) 5 274 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00952 Mepo-Chr4 12516428 12517435 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00952 1 294 Receptor kinase-like Gene Family AT5G38280 52.492 2.55e-105 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mepo4g00952 Pkinase 1.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00952 - - tpra:123893228 531.176