Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00950 ATGATTTGCAGTCATAGTTCTTCCTTCATAATAGCAATAACATTGCTAATACCTTTGCTTGGCAATGGCCAGAATATCCCTCCATCCATTGGATGTCCTTTCAATCTATCTTGCACACATGATAACAAGAAGATTCTTGAAATACCTGCTTATCCAGTCCCTATAAAACTCCTTATAACTGACATTAACTACACATCGCAAGTATTAGAAGCAAGTGATCCTGAAAATTGTCTTCCACGACTCTTACTTCACTCCAATTTCTCTTCATCAATATTTCCTTTTCAGATTATTGGTGGTTCTGGGATGTATCTGCAATTAAATGAATTTACCAATATTAGTTTCTTTAATTGTTCTTCGCTAGGACAACGCTATCTAAAAAAGGACTACCAAATGTATGGAGATGAGCAGCAGGACATGATTTCTTGTCCAATTTATATGGCAGCATTTGACAACGATATCGTTGAATTGAACCTTGTATCCTGCACCAAATTGTCTCAACGAGTTTCACCCCTTATTCTTCCGGTAGAATCTTTATATGGGTCTACGATACGACAAACCTCAATCTCATTATCATGGTCGGAAACAAATCTTCACAAAGGATGCTTTAAATGCAAGAACAAATCAAAGAAGAATATTTTATCCTCTGCAGGTGCAATCATTGGCTCAACTGTGCTTGTTCTTATATTTGGTTTTAGTTTTAAAATATATCGCTATTTTAAGATGAAAACTGAAGATCATACAAGAATTGAAAACTTTTTGAAGGATTATAGGGCTTTAAAGCCAACTAGGTTCTCTTATGCAGACTTAAAGAGAATTACAAATAAATTCAAAGATAAGATAGGCGAAGGGGCTTATGGAGCTGTTTATAAAGGTAAATTATCGAACCAAATTCTAGTAGCGGTGAAGATTCTTAATAATGCAGAGGGAGATGGGAAAGAATTCATAAATGAAGTGGGAACCATGGGCAAAATTCACCATCTCAATGTCGTTCGTTTGCTTGGCTTCTGCGCAGATGGTTTTCGTCGAGCTTTAGTCTATGACTTTTTTCCAAATGGTTCGCTGCAGAAATTCATTTCTCCCCCGAACAACAAAGATGATTTCCTTGGATGGGATAAGTTGCAACAAATTGCTCTAGGCATAGCAAAGGGCATTGAGTATCTCCACCAAGGTTGTGATCAAAGAATTCTACACTTTGACATTAATCCTCATAATGTCTTGCTAGATGACAATTTCACTCCAAAAATCACTGATTTTGGTTTGGCTAAGATGTGTTCCAAAAATCAAAGTATTGTATCCATGACTGCGGCTAAGGGAACATTAGGCTACATGGCACCTGAAGTTTTTTCAAGAAACTTTGGAAATGTCTCGTATAAGTCAGATGTATACAGTTACGGTATGTTATTGCTGGAGATGGTTGGAGGAAGAAAGAATACAAAAACGACCAGTGGTCAAGAAGACATACAAGTTGAGTATCCTGACTGGATACACAACTTGCTTGAAGGAGGAGATATACAAATCCCTATTGATGAAAAAGGATATTTTAGAATTAAAAAAAAATTGGCAATTGTGGGACTATGGTGTATCCAATGGCACCCTCTGCATCGTCCGGCAATGAAATCTGTGATACAAATGCTTCAAGGAGAGGTGGACAAGTTAAAAGTACCAACTAATCTGTTCGGACCAACAATTACAACTAATACAAATGCTAATATTGTTGCAGAACGTATGAATTTGGAGCTGGAGGTGATTGAAGAACTAGAATAG 1764 0.369 MICSHSSSFIIAITLLIPLLGNGQNIPPSIGCPFNLSCTHDNKKILEIPAYPVPIKLLITDINYTSQVLEASDPENCLPRLLLHSNFSSSIFPFQIIGGSGMYLQLNEFTNISFFNCSSLGQRYLKKDYQMYGDEQQDMISCPIYMAAFDNDIVELNLVSCTKLSQRVSPLILPVESLYGSTIRQTSISLSWSETNLHKGCFKCKNKSKKNILSSAGAIIGSTVLVLIFGFSFKIYRYFKMKTEDHTRIENFLKDYRALKPTRFSYADLKRITNKFKDKIGEGAYGAVYKGKLSNQILVAVKILNNAEGDGKEFINEVGTMGKIHHLNVVRLLGFCADGFRRALVYDFFPNGSLQKFISPPNNKDDFLGWDKLQQIALGIAKGIEYLHQGCDQRILHFDINPHNVLLDDNFTPKITDFGLAKMCSKNQSIVSMTAAKGTLGYMAPEVFSRNFGNVSYKSDVYSYGMLLLEMVGGRKNTKTTSGQEDIQVEYPDWIHNLLEGGDIQIPIDEKGYFRIKKKLAIVGLWCIQWHPLHRPAMKSVIQMLQGEVDKLKVPTNLFGPTITTNTNANIVAERMNLELEVIEELE 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00950 587 FunFam PR5-like receptor kinase 349 556 - -
Mepo4g00950 587 Gene3D Transferase(Phosphotransferase) domain 1 349 556 - -
Mepo4g00950 587 SUPERFAMILY Protein kinase-like (PK-like) 255 545 IPR011009 -
Mepo4g00950 587 Gene3D Phosphorylase Kinase; domain 1 248 348 - -
Mepo4g00950 587 ProSiteProfiles Protein kinase domain profile. 274 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g00950 587 Pfam Protein kinase domain 277 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g00950 587 FunFam serine/threonine-protein kinase PBS1-like 241 348 - -
Mepo4g00950 587 PANTHER RUST RESISTANCE KINASE LR10-RELATED 245 557 IPR045874 GO:0004672
Mepo4g00950 587 ProSitePatterns Protein kinases ATP-binding region signature. 280 302 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00950 Mepo-Chr4 12498695 12500567 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00950 217 555 Receptor kinase-like Gene Family AT1G66910 46.667 3.77e-104 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mepo4g00950 Pkinase 8.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00950 - - tpra:123893290 737.258