Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00945 ATGCAAGATATCAAATCTTGTCCAATTTATGTTGCTGATTCGGATGAAGACAGTGTTGTTGAATCTGACTTAGTATACTGCATCAAACTGTTTGATCGTGTTTATCCATTCCAGGCATTTGGTATTCAAAACAACAGACTCTCATTTACATGGTCTGCAACCAATTTTGACATAGGATGCTTGAAATGTGAACACAAATCAAAGAAGAAGATTACACTCATTATTTTATCCACTGCAGGTGTAATCTTTGGTTCAACTTTGCTAGTGCTTCTGATCTGTGCTATTGTTCGAGTTCATCGCCATTTCAAGATGAAAGGCGAAGATCATACAAGAATCAAAAACTTTTTGAAGGATTATAAGGCTTTAAAGCCAACCAGATTCTCCTATGCTGACATAAAGAGAATCACAAATAAATTTAAGCATATGATAGGAGAAGGAGCTCATGGAGCTGTTTACAAAGGTAAATTATCGAGTCAAATTATGGTTGCTGTTAAAATGCTCAATAACGCAGAAGGAGATGGGAATGAGTTCATAAATGAACTGGGAACGATGGGAAAAATCCACCATCTCAATGTTGTCCGTTTGCTTGGCTTTTGCGCCGATGGATTTCATCGTGCTCTAGTCTATGACTTCTTCCCAAATGGTTCGTTGCAGAAATTCATTTCTCCTCCTAGTAACAGAGATGGTTTCCTCGGATGGGACAAGATGCAACAAATTGTTCTAGGAATAGCCAACGGAATTGAGTATCTTCACCAGGGTTGTGATCAAAGAATTCTTCACTTTGACATCAATCCTCATAACGTATTGATAGACGAAAATTTCACCCCAAAAATTACAGACTTTGGTTTGGCTAAGACGTGCTCGAAAAATAAAAGTACTATATCTATGACTGCAGCCAGAGGAACATTAGGATACATGGCACCCGAAGTTTTTTCTAGAAACTTTGGTAATGTCTCTTATAAGTCTGATATATATAGCTATGGTATGTTGCTATTGGAAATTGTTGGAGGAAGAAAGAATACAAACACAACCACAAATGAAGAAAACTTTCAAGTTTTATATCCAGATTGGATTCACAGTTTGCTTGAAGGGGAAGAAATACAAATCCCTATAGATGATGTGGGAGATTTAAGAATTGCGAAAAAATTGGCAATCGTGGGACTTTGGTGCATCCAATGGCAACCTATACATCGTCCGTCTATGAAAACTGTGATGCAAATGCTGCAAGGAGATGGAGACAAGTTAAAAGTTCCCTGCAACCCTTTTGGACCTACTACTTCAACAAATACATTTACTAGTATTGTTGCAGAACGTATGAATTTGGAGCTTGAAGTGATTCAAGAAATAGATTAA 1353 0.3732 MQDIKSCPIYVADSDEDSVVESDLVYCIKLFDRVYPFQAFGIQNNRLSFTWSATNFDIGCLKCEHKSKKKITLIILSTAGVIFGSTLLVLLICAIVRVHRHFKMKGEDHTRIKNFLKDYKALKPTRFSYADIKRITNKFKHMIGEGAHGAVYKGKLSSQIMVAVKMLNNAEGDGNEFINELGTMGKIHHLNVVRLLGFCADGFHRALVYDFFPNGSLQKFISPPSNRDGFLGWDKMQQIVLGIANGIEYLHQGCDQRILHFDINPHNVLIDENFTPKITDFGLAKTCSKNKSTISMTAARGTLGYMAPEVFSRNFGNVSYKSDIYSYGMLLLEIVGGRKNTNTTTNEENFQVLYPDWIHSLLEGEEIQIPIDDVGDLRIAKKLAIVGLWCIQWQPIHRPSMKTVMQMLQGDGDKLKVPCNPFGPTTSTNTFTSIVAERMNLELEVIQEID 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00945 450 FunFam S-receptor-like serine/threonine-protein kinase 107 211 - -
Mepo4g00945 450 Pfam Protein kinase domain 140 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g00945 450 PANTHER RUST RESISTANCE KINASE LR10-RELATED 109 425 IPR045874 GO:0004672
Mepo4g00945 450 Gene3D Phosphorylase Kinase; domain 1 111 211 - -
Mepo4g00945 450 Gene3D Transferase(Phosphotransferase) domain 1 212 417 - -
Mepo4g00945 450 SUPERFAMILY Protein kinase-like (PK-like) 120 408 IPR011009 -
Mepo4g00945 450 FunFam PR5-like receptor kinase 212 420 - -
Mepo4g00945 450 ProSitePatterns Protein kinases ATP-binding region signature. 143 165 IPR017441 GO:0005524
Mepo4g00945 450 ProSiteProfiles Protein kinase domain profile. 137 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00945 Mepo-Chr4 12356357 12357796 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00945 67 421 Receptor kinase-like Gene Family AT1G66910 45.152 3.62e-103 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mepo4g00945 Pkinase 1.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00945 - - mtr:25488766 730.324