Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00944 ATGAATCAAACAAATCCTCAAGGTTTTGAATTATCATGTACAGATGAAGATGAAACCATGTTAGAATTTCCCACAATTCCACTACAACTTTTCATAAAACGAATAGACTACAAAACTCAAATGTTCCAAATCTACGACCCGAAAAATTGTCTTGCAAGACAATTATTAAAACTAGGAAACCTATCAGTTTCGCCATTTCAGTTTCACTTCCATGAGTTTAATATACAGCGTAATGTATCTTTCTTTCGTTGTGATTCGAACAAAGATTGTTCGGTTCAGCAACGTGAATCTAGTGGTGATTTTATTGATCCTGAATTGGTTTCATGTAGAAAAGTGAGTGAAGTTTTGAATGTAGGTTGGATGATTGAGGAATGGGAAGATGATGTTACAGAGAGTTTGATTATGGAATGGTCTAAACCAAATTGTAGTTTGTGTGAAATCCAAGGGAAGAAATGTAAATGGAAGAATGGTGGTAAAAATAGTGAAATTGAATGTTTTGTTTGTAAATCAGATGGGATTGCAAAATCTACTGTTCTTCTAATTACTGCTGGGGTTATAGTTGGTTCCATGGTTTTGCTGCTATTGGCAAATGTATTTCTTCGCATTTATCGTTATTTTAAGATGAAAGGAGATGACATTGCAAGGATAGAGAAGTTTTTAGAGGATTACAGGGCAATGAAACCTACTAGATTCACTTATGCTGATATTAAGAGAATAACAAATGGTTTCAAAGAGAGTTTAGGAGAAGGAGCTCATGGAGCCGTGTTCAAAGGTATGCTCTCCCAAGAAATTTTGGTTGCTGTGAAGGTACTCAATGAAACACAAGGAGATGGAAACGATTTCATCAATGAAGTCGGAACTATGGGAAAAATTCATCATGTCAATGTCGTTCGTTTGCTTGGTTTCTGTGCCGATGGATTCCACCGAGCACTTGTTTATGATTTCTTTCCTAATGGCTCGTTGCAGAATTTCTTGGCACCATCGGAGAACAAGGATGTTTTTCTCGGTTGGGAAAAGTTGCAACGAATTGCTCTTGGTGTTGCAAGAGGGATTGAGTATCTTCATATTGGTTGTGATCATAGAATACTTCACTTTGACATCAATCCACACAATGTGTTAATAGATGATAACTTGAGTCCCAAAATAACCGACTTTGGACTTGCTAAATTGTGTCCGAAAAACCAAAGCACAGTGTCTATGACTGCAGCGAGAGGAACCTTGGGATACATTGCACCTGAAGTTTTCTCGAGAAACTTCGGAAATGTTTCGTATAAGTCTGATATTTATAGCTATGGAATGTTGTTGCTTGAGATGGTTGGTGGAAGAAAGAATACCAACGTATCTGCAGAGGAAACTTTCCAAGTTCTGTACCCAGAATGGATTCATAATTTGATTGAAGGTAAAGAAGTACGAGTTAATATTGAGGATGAGGGAGATGTTAGAATTGCAAAGAAACTTGCGCTGGTCGGACTTTGGTGTATTCAGTGGAATCCAGTGGATCGGCCATCCATGAAAACCGTGGTACAAATGCTTGAAGGTGATGGAGAAAATTTAATGGCACCCCCTACTCCTTTTGACTCTATTGGTGCTAATAGAACAAATCAAGTTATTCCAACCAGACATCTAAATTTTGAGTTGGAACTTATTCCTGAAATAGACTAA 1662 0.3742 MNQTNPQGFELSCTDEDETMLEFPTIPLQLFIKRIDYKTQMFQIYDPKNCLARQLLKLGNLSVSPFQFHFHEFNIQRNVSFFRCDSNKDCSVQQRESSGDFIDPELVSCRKVSEVLNVGWMIEEWEDDVTESLIMEWSKPNCSLCEIQGKKCKWKNGGKNSEIECFVCKSDGIAKSTVLLITAGVIVGSMVLLLLANVFLRIYRYFKMKGDDIARIEKFLEDYRAMKPTRFTYADIKRITNGFKESLGEGAHGAVFKGMLSQEILVAVKVLNETQGDGNDFINEVGTMGKIHHVNVVRLLGFCADGFHRALVYDFFPNGSLQNFLAPSENKDVFLGWEKLQRIALGVARGIEYLHIGCDHRILHFDINPHNVLIDDNLSPKITDFGLAKLCPKNQSTVSMTAARGTLGYIAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNTNVSAEETFQVLYPEWIHNLIEGKEVRVNIEDEGDVRIAKKLALVGLWCIQWNPVDRPSMKTVVQMLEGDGENLMAPPTPFDSIGANRTNQVIPTRHLNFELELIPEID 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00944 553 Gene3D Transferase(Phosphotransferase) domain 1 316 519 - -
Mepo4g00944 553 ProSitePatterns Protein kinases ATP-binding region signature. 247 269 IPR017441 GO:0005524
Mepo4g00944 553 Pfam Protein kinase domain 244 509 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g00944 553 PANTHER RUST RESISTANCE KINASE LR10-RELATED 215 530 IPR045874 GO:0004672
Mepo4g00944 553 Gene3D Phosphorylase Kinase; domain 1 216 315 - -
Mepo4g00944 553 FunFam S-receptor-like serine/threonine-protein kinase 212 315 - -
Mepo4g00944 553 FunFam PR5-like receptor kinase 316 522 - -
Mepo4g00944 553 SUPERFAMILY Protein kinase-like (PK-like) 223 512 IPR011009 -
Mepo4g00944 553 ProSiteProfiles Protein kinase domain profile. 241 519 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00944 Mepo-Chr4 12352494 12354697 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00944 185 524 Receptor kinase-like Gene Family AT1G66910 47.863 2.33e-105 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mepo4g00944 Pkinase 3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00944 - - gmx:100819302 822.772