Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00943 ATGTTCTCCGGGAAATACTATGTACAACACATTGATTACAAGAGATTTACAATTTCATTAAGTGACGCTGGTGCAGTGGAAGACACTAACTGCTCTTTTATCCCGCGGTACTTTTTATATGATCGAAGTTTCAATAATGTTCTTTTTGGTGAAGACAATTTTGGATCTGAGCCATTCATTCTGGATCAAATAACTCCATCGAGAATAGCGTATTTCAATTGTTCTAATCCAATAAACGATCCATGGTACGTTAAGGTGGACATGAGTCGATGTAGCACACATGGGAATAGTAGTACTAATCATGTGTATGCTGTTTTGGAACCATCATTGTATGAGTATCGTGTTGAGGATATTAAGGTTGGGTGTGATTTTATGGTGGCTACATTGGGTAAGGCGCAATCGGAGATTGTGAAAGAGAAGGTTTCTTATGATGAGATTCATGGGATGATAGTTGATGGATTTGAGGTTTCATGGTTGCCTGTAATTTGTGAAGATAGATGTGGAAAGGGAACAAGTTGTAAGGTTGTTGATGAAGAAAGAGGAGAAGTTCAATGTAATAAGCAATTATGTCATTATGCTTACCAAACAACTGATAAGTGTGGACTTCAAGACCAGATATTTGGTTATACTCGTGCATATCTTAGAGAAATTGTTATTGGACTTGGAAGTAGAATCACATTTAGTACAAGACAATTGGACAATCCAGTTGGACTAGAATATTTTGATGGAGGAATAATTATAGGAAGAAATGTTATACCATTATTCATAGGAGTCAGATTTCTGTTTGGAATTATAGTTCTACTGGTGCTATTTATCTATAAATGGAGAAGGAGACATTTATCAATGTATGATAACATTGAAAACTTTTTGCTAGAAAGCAATCTAAATCCTATTAGGTATGAATACAAAGAAATCAAGAAGATGACTGGAGGTTTTAGAGTGAAATTAGGTCAAGGAGGTTTTGGTGCTGTGTACAAAGGAAAGCTAAGAAGTGGACCGGATGTCGCAATAAAGATGTTAACAAAGTCGAATGTTAATAATGGACAAGATTTTATTAACGAAGTTGCGACCATTGGAAGAATACATCATGTTAATGTGGTACGTCTTGTTGGATACTGTGTTGAAGGAAAAAAGAGTGCGCTCGTTTACGAATTCATGCCAAATGGGTCATTGGATAAATACATTTTCCCTAAAGAAGGAATTGAACCTTTGAGTTACGAGAAAATATATGAAATATCTCTCGGAATAGCTCGTGGGATAGAGTATCTGCATCGAGGTTGTGATATGCAAATTCTACATTTTGATATTAAGCCTCATAATATTCTTCTAGACGAAGACTTCGTTCCAAAGGTTTCGGATTTTGGACTTGCAAAGCTATATCCTGTAAATGATAGCATTGTTCCATTAACTGCGGCAAGAGGAACTTTGGGATACATGGCTCCTGAATTGTTCTACAAAAATATCGGAGGAGTGTCTTACAAGGCTGATGTATATAGCTTTGGAATGCTTTTGATGGAAATGGCAGGTAAGAGGAAGAACTCGGACCCTAACGCAGCACATTCAAGTCAACATTACTTCCCATTCTGGATTTATGATCAATTTAAAGAAGAGAGAGAGATTGAAATAATGGAAGATGTCTCCGAACAAGGAATGACTGTAGCCAAAAGGATGTTTATGGTTGCACTTTGGTGTATTCAGTTGAAACCGAGTGACCGTCCTTCAATGAACAAAGTAGTTGAGATGCTTGAAGGGAAAACTGAAAGCCTTGAATTGCCTCCAAGGCCTTCTTTTTATGCAAATGAAAATTATAAAAATCATGATGAAATCAGCTCTGATCATACATCATGGGGTGATTCCACTAGCATTGGCCAAACCTTGACTAATTATTCATTAGACGATTAA 1902 0.3665 MFSGKYYVQHIDYKRFTISLSDAGAVEDTNCSFIPRYFLYDRSFNNVLFGEDNFGSEPFILDQITPSRIAYFNCSNPINDPWYVKVDMSRCSTHGNSSTNHVYAVLEPSLYEYRVEDIKVGCDFMVATLGKAQSEIVKEKVSYDEIHGMIVDGFEVSWLPVICEDRCGKGTSCKVVDEERGEVQCNKQLCHYAYQTTDKCGLQDQIFGYTRAYLREIVIGLGSRITFSTRQLDNPVGLEYFDGGIIIGRNVIPLFIGVRFLFGIIVLLVLFIYKWRRRHLSMYDNIENFLLESNLNPIRYEYKEIKKMTGGFRVKLGQGGFGAVYKGKLRSGPDVAIKMLTKSNVNNGQDFINEVATIGRIHHVNVVRLVGYCVEGKKSALVYEFMPNGSLDKYIFPKEGIEPLSYEKIYEISLGIARGIEYLHRGCDMQILHFDIKPHNILLDEDFVPKVSDFGLAKLYPVNDSIVPLTAARGTLGYMAPELFYKNIGGVSYKADVYSFGMLLMEMAGKRKNSDPNAAHSSQHYFPFWIYDQFKEEREIEIMEDVSEQGMTVAKRMFMVALWCIQLKPSDRPSMNKVVEMLEGKTESLELPPRPSFYANENYKNHDEISSDHTSWGDSTSIGQTLTNYSLDD 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00943 633 CDD STKc_IRAK 316 584 - -
Mepo4g00943 633 Gene3D Transferase(Phosphotransferase) domain 1 386 592 - -
Mepo4g00943 633 ProSitePatterns Serine/Threonine protein kinases active-site signature. 431 443 IPR008271 GO:0004672|GO:0006468
Mepo4g00943 633 FunFam serine/threonine-protein kinase PBS1-like 281 385 - -
Mepo4g00943 633 SMART serkin_6 310 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g00943 633 Gene3D Phosphorylase Kinase; domain 1 287 385 - -
Mepo4g00943 633 SUPERFAMILY Protein kinase-like (PK-like) 294 583 IPR011009 -
Mepo4g00943 633 FunFam PR5-like receptor kinase 386 593 - -
Mepo4g00943 633 Pfam Protein kinase domain 315 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g00943 633 PANTHER RUST RESISTANCE KINASE LR10-RELATED 283 602 IPR045874 GO:0004672
Mepo4g00943 633 ProSiteProfiles Protein kinase domain profile. 310 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g00943 633 ProSitePatterns Protein kinases ATP-binding region signature. 316 338 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00943 Mepo-Chr4 12349045 12351526 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00943 249 595 Receptor kinase-like Gene Family AT4G18250 46.761 1.33e-105 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mepo4g00943 Pkinase 3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00943 - - lja:Lj0g3v0275229.4 924.08