Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00942 ATGGAACTGAAGCAAACTCTTGAGCAACTGTGTAAGATTTTATTGTTTTCAACAACAATAGTATTGTTAGTAGTTGAAGATGTTGAAGCCCTTACTTCCTCCCTACCGGGCTGCAAAAAATCATGTGGAGATGTTGAAATTCCATATCCCTTTGGAATAGGCAATTCATCAATACCAAATCAAGGATCTTGTTTTTTGAAGCAGCCTATGTTTAAGGTCACATGTATAAACGATTCCATATTATATTGGGGTGTTAATAGTGAGAACATAAATACTTCTATACAAGTATCACACATAGATATATTGAAAGGTGAAATTGAGTTGTGGTTTTACGTTGGAAGGTATTGTAGTACACGGAGGTATAATCGCCCCTGGCTTCGATGGCCATCGCATGGTTTTAGTATTTCAAGTAAGGAAAATAACTTCCTAACCGTTGGTTGTGACAGCTACGGCTATCTCAATAGTATTTATGAAGGGGACACATACTCAACAGGATGCATAACAAGATGTTACGGAAACAGGAGGAAGATCGAAAATGGAACGTGTTCCGGTATTGGTTGTTGTCAAGTGGATATTCCAACTAACATGAGGAATATCAGTATTGAAGCATCTTATTTCCCTAATTCAACAGAAAATTTAGGATGCAGCGTTTCTTTTATAGTCAAACATGGATTCTACAATTTTTCTACCATTGATCTACTTGACTTCCGTTTTGATAAGGTCCCTTTAATTCTTGATTGGAGCGTAGGGAGAAAAAATTGTAATGCTGCCAAGAGTGAAGTGGATTACGCTTGTAGGAACAATAGCTTTTGCGACGACAAAGACATTAATTATGGCTATCGATGCAAATGCAAGGACGGTTATGAAGGAAACCCATACCATCCAGATGGATGCAAAGACATCGATGAATGTAAGACAACAAATCATACATGCATAGATGAAAATCATTGTCGCAATACAGATGGCTCTCACGAATGTTTTTGTCTCGATGGTCAATCTGGAAAAGGAACAAAAGAAGGAGGGTGCCGTCGACAAGATGTACTCGCAAAGGTATCTATAGGAGCAAGTGCAGGTTTTATTATTCTATTTGTGGGGATTGCAGCGTTGTACGTGATATATCAGAGAAGAAAACTCAAAAATTTAAGAGAGAAATTCTTTCAACAAAACGGTGGTTTCATTTTGTTACGCAAACTCTCTAAAAGGGAAGACACATCAGGAACTGCTCATATATTCAAAGAAGACGAGCTTAAGAAGGCAACCAACAACTTCGATGAGAGCTTAATTATTGGTAGAGGAGGTTTTGGTACAGTTTTCAAAGGAAATTTGGCAGACAATAGAATTGTTGCAATCAAGAAGTCTAAAATAATGGATACTACCCAAGTGGAACAATTCATTAACGAGGTAGTTGTTCTGTCGCAAATAAATCACAGAAACGTTGTCAAACTCCTGGGATGTTGTTTGGAGACAGAAGTTCCTTTACTAGTCTATGAATTTGTTAGCAATGGCACCCTTTTCGATTTCATACACAATATAAATAAAGCTAATAAAGCAACTTGGAAGACGCGGTTAAGGATAGCAGCAGAAACCGCTGCAGCTTTATCCTATTTACATTCAGCTGCATCAATACCAATTATTCATAGGGATGTTAAGAGTACCAACATTCTGTTGGATGTCAATTACACTGCTAAAGTGTCTGATTTTGGAGCTTCAAGATTGGTTCCAATTGATCACACTGAGATAGCCACAGTGGTGCAAGGAACTCTTGGATACTTAGATCCAGAGTATATGCAAACACACCAGTTAACAGATAAAAGTGATGTTTATAGTTTTGGTGTCGTTCTTGCAGAGCTATTAACCGGAGAAAAACCTATTTCTTTTACTAGGCCGGAAGATAAAAGAAGTCTTGCTAATCACTTCCTATCTTTTTTAAAAGAGAATCACATGTTTGAAGTTCTTCAAGTTGGTATCTTGAATGAAGAAAATAAAGAGGAAGTCAAACAAGTAGCTATCCTTGCAGCAAAGTGCTTGAGACTTACAGGCGAGGAAAGACCTAGCATGAAAGAAGTGGCTATGGAGTTGGAAGGTATGAGGTTAGGGGAAAAGCACCCTTGGACTAATTCAGAGATAAATATAGAGGAAACTCAATCCTTGCTTCAAGATACATCATCCAACATTAATTATGGAACTGGTGATAGCAGCAAGGATGGATATAGTGGGTATGACAGCTTGAAAGTTCATGCACCAATGTCCTTATTGGATGATGGAAGATGA 2271 0.3787 MELKQTLEQLCKILLFSTTIVLLVVEDVEALTSSLPGCKKSCGDVEIPYPFGIGNSSIPNQGSCFLKQPMFKVTCINDSILYWGVNSENINTSIQVSHIDILKGEIELWFYVGRYCSTRRYNRPWLRWPSHGFSISSKENNFLTVGCDSYGYLNSIYEGDTYSTGCITRCYGNRRKIENGTCSGIGCCQVDIPTNMRNISIEASYFPNSTENLGCSVSFIVKHGFYNFSTIDLLDFRFDKVPLILDWSVGRKNCNAAKSEVDYACRNNSFCDDKDINYGYRCKCKDGYEGNPYHPDGCKDIDECKTTNHTCIDENHCRNTDGSHECFCLDGQSGKGTKEGGCRRQDVLAKVSIGASAGFIILFVGIAALYVIYQRRKLKNLREKFFQQNGGFILLRKLSKREDTSGTAHIFKEDELKKATNNFDESLIIGRGGFGTVFKGNLADNRIVAIKKSKIMDTTQVEQFINEVVVLSQINHRNVVKLLGCCLETEVPLLVYEFVSNGTLFDFIHNINKANKATWKTRLRIAAETAAALSYLHSAASIPIIHRDVKSTNILLDVNYTAKVSDFGASRLVPIDHTEIATVVQGTLGYLDPEYMQTHQLTDKSDVYSFGVVLAELLTGEKPISFTRPEDKRSLANHFLSFLKENHMFEVLQVGILNEENKEEVKQVAILAAKCLRLTGEERPSMKEVAMELEGMRLGEKHPWTNSEINIEETQSLLQDTSSNINYGTGDSSKDGYSGYDSLKVHAPMSLLDDGR 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00942 756 SMART egf_5 303 343 IPR000742 -
Mepo4g00942 756 SMART egf_5 253 299 IPR000742 -
Mepo4g00942 756 Pfam Protein kinase domain 427 689 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g00942 756 Gene3D Phosphorylase Kinase; domain 1 395 498 - -
Mepo4g00942 756 MobiDBLite consensus disorder prediction 722 741 - -
Mepo4g00942 756 Gene3D Transferase(Phosphotransferase) domain 1 499 718 - -
Mepo4g00942 756 MobiDBLite consensus disorder prediction 722 736 - -
Mepo4g00942 756 SUPERFAMILY Protein kinase-like (PK-like) 405 693 IPR011009 -
Mepo4g00942 756 FunFam Wall-associated receptor kinase 2 499 716 - -
Mepo4g00942 756 SUPERFAMILY EGF/Laminin 300 335 - -
Mepo4g00942 756 CDD STKc_IRAK 429 696 - -
Mepo4g00942 756 Gene3D Laminin 252 342 - -
Mepo4g00942 756 Pfam Wall-associated kinase 180 285 IPR013695 GO:0004674|GO:0016020
Mepo4g00942 756 ProSiteProfiles Protein kinase domain profile. 423 705 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g00942 756 Pfam Wall-associated receptor kinase galacturonan-binding 38 106 IPR025287 GO:0030247
Mepo4g00942 756 ProSitePatterns Protein kinases ATP-binding region signature. 429 452 IPR017441 GO:0005524
Mepo4g00942 756 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 33 705 IPR045274 GO:0007166
Mepo4g00942 756 SMART serkin_6 423 705 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g00942 756 CDD EGF_CA 300 335 - -
Mepo4g00942 756 ProSiteProfiles EGF-like domain profile. 300 338 IPR000742 -
Mepo4g00942 756 Pfam Calcium-binding EGF domain 300 339 IPR001881 GO:0005509
Mepo4g00942 756 FunFam Wall-associated receptor kinase 2 393 498 - -
Mepo4g00942 756 ProSitePatterns Serine/Threonine protein kinases active-site signature. 544 556 IPR008271 GO:0004672|GO:0006468
Mepo4g00942 756 SMART egfca_6 300 343 IPR001881 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00942 Mepo-Chr4 12342316 12345487 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00942 38 737 Receptor kinase-like Gene Family AT1G21230 45.125 0.0 566
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Mepo4g00942 Pkinase 1.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00942 - - gmx:100778914 966.066