Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00941 ATGGTCACAACAGTATTTGCATCCAATGAATCCTTTTCTTCATCCCTACCCGGTTGCAAAAACACATGTGGTGATGTAAAAATTCCATTTCCATTTGGAATATCAATATCATCAATACCAAATCAAGGACCATGTTTCCTGGAGCCCAAATTTGAACTCATATGTGAAAATGACACAAAATTACTTTGGGGCAATGTACAAGTATACAATATAAACATCCTCCAAGGTCAACTTGAAGTGACGACTTTTGTCTCAGGTTATTGTAATAGTGAAAATTATTCTCAACCCACCTTAGACACTGCCCGTTTCAGGATATCAAGCACGGAAAACAAGTTCATAACGGTTGGTTGTGATAGTTACGGTTATCTCAACAGTATTTACAACGATGAAACATATTCAACCGGTTGCTTATCAAGATGCTACGGTAATCGAAATCGCATTGAAAACGGAACATGTTCGGGTATTGGTTGTTGTCAAGTTGATATTCCACATATGATGAGGAATATAAGTGTACAAGTTTTTGATTTTCCTAATTCCACGGAATTTTGGGGATGTAGCTATTCTTTTGCTGTTAAAGATGGATCCTATAATTTTTCTGTTGCTCATTTGGACAATTTTCCTTATACAAAGCTTCCATTGATTCTTGATTGGAGTGTGGGAAACACTTGTAAGGAAGATGACTATGCTTGCAAGAAGAATAGTGATTGTGTTGATGTGGACAATGATTTTGGTTACCAATGTAAATGTAAGGAAGGTTATGAAGGAAACCCGTATCATCCAGATGGCTGCATGGGATCAAGTGCTGGACTAATTGTCCTATTTGTTGCTGTTTCTTCTCTATACTTGGCATACCAAAAAAGGAAACTCATCAAACTAAAGCAAAAATTCTTTCAACAAAATGGAGGTTCAATTTTGCTACAACAACTCTCAACAAGAGAACACACATCACAATCAGCTCAAATATTCACTAAAAAGGAACTTAAGAAAGCCACCAAAAACTACGATGAAAGTTTAATCATCGGCAAAGGAGGTTTTGGTACAGTTTTCAAAGGAATCTTGTCTGATAACAAAATTGTCGTAGTCAAAAAGTCCAAAATAATAGACGCAAATCAGATTGAGCAGTTCATTAATGAGGTAGTTGTTCTATCCCAAATAAATCATAGGAATGTGGTCAAACTTCTAGGATGTTGTTTGGAGACAGAAGTTCCTTCGTTGGTGTATGAATTTGTTAGCAACGGAACACTTTTCGATTTCATACAAAATTGTAAAGATAAAACAAGTAATCCAACATGGAAAACACGTTTAAGGATAGCAGCAGAGACAGCTGGAGCTTTATCGTATCTACATTCAGCTGCATCAATTCCAATTATCCATAGAGATGTTAAGAGTACCAACATTCTATTGGATGACAATTACACTGCAAAAGTTTCCGACTTCGGAGCTTCAAGATTGGTTCCACTTGATCAAACCGAGATAGCAACAATGGTGCAAGGAACACTTGGATACTTAGATCCGGAGCATATGCAAACACATCAATTAACTGAGAAAAGTGATGTTTATAGTTTTGGTGTAGTTCTTGCAGAGCTTCTAACCGGGGACAAACCTCTTTCTTTTAATAGGCCAGAAGAAGCCATTAGTCTTGCTATGCACTTTTTGTCTTGTTTAAAACAAGATAAACTTTTTGAAGCTACTCAAGTTGGAATTTTGAATGATGATAACAAGAAAGAGATTAAGGAGGTTGCTATTCTTGCTGCAAGGTGTTTAAGACATAGAGGTGATGAAAGACCTAGTATGAGGGAAGTAGCTATGGAGTTGGATGGCATAAGGTTAATGGAGAAGCATCCTTGGAATGATACAGAGCTAAATTTTGAGGAGAGTCAACGTTTACTTCGTGAGGCATCTTGTAGCATTTACAATGAAACTGGTGATAGCTATAACCTTGGATATAGTGGGTATGATAGCTTGAAAGATCAACCATTGATTCCCTTGGATGATGGAACATGA 2004 0.3688 MVTTVFASNESFSSSLPGCKNTCGDVKIPFPFGISISSIPNQGPCFLEPKFELICENDTKLLWGNVQVYNINILQGQLEVTTFVSGYCNSENYSQPTLDTARFRISSTENKFITVGCDSYGYLNSIYNDETYSTGCLSRCYGNRNRIENGTCSGIGCCQVDIPHMMRNISVQVFDFPNSTEFWGCSYSFAVKDGSYNFSVAHLDNFPYTKLPLILDWSVGNTCKEDDYACKKNSDCVDVDNDFGYQCKCKEGYEGNPYHPDGCMGSSAGLIVLFVAVSSLYLAYQKRKLIKLKQKFFQQNGGSILLQQLSTREHTSQSAQIFTKKELKKATKNYDESLIIGKGGFGTVFKGILSDNKIVVVKKSKIIDANQIEQFINEVVVLSQINHRNVVKLLGCCLETEVPSLVYEFVSNGTLFDFIQNCKDKTSNPTWKTRLRIAAETAGALSYLHSAASIPIIHRDVKSTNILLDDNYTAKVSDFGASRLVPLDQTEIATMVQGTLGYLDPEHMQTHQLTEKSDVYSFGVVLAELLTGDKPLSFNRPEEAISLAMHFLSCLKQDKLFEATQVGILNDDNKKEIKEVAILAARCLRHRGDERPSMREVAMELDGIRLMEKHPWNDTELNFEESQRLLREASCSIYNETGDSYNLGYSGYDSLKDQPLIPLDDGT 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00941 667 FunFam Wall-associated receptor kinase 2 304 409 - -
Mepo4g00941 667 SMART serkin_6 334 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g00941 667 Gene3D Transferase(Phosphotransferase) domain 1 410 629 - -
Mepo4g00941 667 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 11 614 IPR045274 GO:0007166
Mepo4g00941 667 ProSitePatterns Protein kinases ATP-binding region signature. 340 363 IPR017441 GO:0005524
Mepo4g00941 667 FunFam Wall-associated receptor kinase 2 410 628 - -
Mepo4g00941 667 Pfam Wall-associated receptor kinase galacturonan-binding 19 79 IPR025287 GO:0030247
Mepo4g00941 667 Gene3D Laminin 216 261 - -
Mepo4g00941 667 CDD STKc_IRAK 340 608 - -
Mepo4g00941 667 Pfam Protein kinase domain 336 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g00941 667 ProSiteProfiles EGF-like domain profile. 219 264 IPR000742 -
Mepo4g00941 667 Gene3D Phosphorylase Kinase; domain 1 299 409 - -
Mepo4g00941 667 SUPERFAMILY Protein kinase-like (PK-like) 312 605 IPR011009 -
Mepo4g00941 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 456 468 IPR008271 GO:0004672|GO:0006468
Mepo4g00941 667 ProSiteProfiles Protein kinase domain profile. 334 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00941 Mepo-Chr4 12336428 12339368 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00941 19 666 Receptor kinase-like Gene Family AT1G21230 41.918 5.89e-170 502
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Mepo4g00941 Pkinase 7.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00941 - - gmx:106795446 806.979