Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00940 ATGAAACTGAACACAAACCTCGCGCAATTATGCACAATTTTAATATCCATGGTAACAGTAGTATTTGCATCCAATGAATCCTTTTCTTCATCCTTACCCGGTTGCAAAAATACATGTGGAGATGTCAAAATTCCATTTCCATTTGGAATATCAGATTCATCAATACCAAATCAAGGTCCCTGTTACCTAGAGCCCAAATTTGAACTCATATGTGAAAATGACACAAAATTACTTTGGGGCAATGTACAAGTGGACAACATAAACATCCTCCAAGGAGAACTTGAAGTGTCATTTTTTGTCTCCAGTTATTGTGGTAGGGAAAATTCCAACGAACCCACTTTAGACACTGCTGTTTTCAGGATATCAAGCACGGAAAACAAGTTCATAACGGTTGGTTGTGACAGTTACGGTTATCTCAACAGCATTTACAACGAAGAAACATATTCAACCGGTTGCTTAACAAGATGTTACGGTAATCGAAATCAAATTGAAAACGGAACATGTTCCGGTATTGGTTGTTGTCAAGTTGATATTCCACATATGATGAGGAATATAAGTGTACAAGTTTTTGATTTTCCTAATTCCACGGATTCTTTGGGGTGTAGTTTTTCATTTGTTGTTAAAGATGGATCCTATAATTTTACTATTTCTGATTTGGATAATTTTCCTTATAAGATGCTTCCATTGATTCTTGATTGGAGTGTGGGAAAAACTTGTAAGGAAGATGACTATGCTTGCAAGAAGAATAGTGATTGTGTTGATGTGGACATTGATTTTGGTTACCAATGTAAATGTAAGGAAGGTTATGAAGGAAACCCGTATCATCCAGATGGCTGCATAGATGGGCTTTATGAATGTTTTTGTCCTGATGGACAATCTGGAAATGGAACAAAGGCAGGAGGTTGTAATAGACGAGATGTTATTACCAAGATTGCCATTGGATCAAGTGCTGGACTAATTGTCCTATTTGTTGCTGTTTCTTCTCTATACTTGACATACCAAAAAAGGAAACTCATCAAACTAAAGCAAAAATTCTTTCAACAAAATGGAGGTTCAATTTTGCTACAACAACTCTCAACAAGAGAAGACACATCACAATCAGCTCAAATATTCACTGAAGAGGAACTTAAGAAAGCCACCAAAAACTACGATGAAAGTTTAATCATCGGCAAAGGAGGTTTTGGTACAGTTTTCAAAGGAATCTTGCCTGATAACAAAATTGTCGCAGTCAAAAAGTCCAAAATAATAGACGCAAATCAGATCGAGCAGTTCATTAATGAGGTAGTTGTTCTGTCCCAAATAAATCATAGGAATGTGGTCAAACTTCTAGGGTGTTGTTTGGAGACAGAAGTTCCTTCGTTGGTGTATGAATTTGTTAGCAACGGAACACTTTTCGATTTCATACAAAATTGTAAAGATAAAACAAGTAATCCAACATGGAAAACACGTTTAAGGATAGCAACAGAGACAGCTGGAGCTTTATCGTATCTACATTCAGCTGCATCAATTCCAATTATCCATAGAGATGTTAAGAGTACCAACATTCTATTGGATGACAATTACACTGCAAAAGTTTCCGACTTCGGAGCTTCAAGATTGGTTCCACTTGATCAAACCGAGATAGCAACAATGGTGCAAGGAACACTTGGATACTTAGATCCGGAGTATATGCAAACACATCAATTAACTGAGAAAAGTGATGTTTATAGTTTTGGTGTAGTTCTTGCAGAGCTTCTAACTGGGGACAAACCTCTTTCTTTTAATAGGCCAGAAGAAACCATTAGTCTTGCTATGCACTTTTTGTCTTGTATAAAACAAGATAAACTTTTTGAAGCTATTCAAGTTGGAATTTTGAATGATGATAACAAGAAAGAGATTAAGGAGGTTGCTATTCTTGCTGCAAGGTGTTTAAGACTCAGAGGTGATGAAAGACCTAGTATGAGGGAAGTAGCTATGGAGTTGGATGGCATAAGGTTAACGGAGAAGCATCCTTGGAATGATACAGAGCTAAATTTTGAGGAGAGTCAACGTTTACTTCATGAGGCATCTTGTAGCATTTACAATGAAACTGGTGATAGCTATAACCTTGGATATAGTGGGTATGATAGCTTGAAAGATCAACCATTGATTCCCTTGGATGATGGAAGATGA 2151 0.3682 MKLNTNLAQLCTILISMVTVVFASNESFSSSLPGCKNTCGDVKIPFPFGISDSSIPNQGPCYLEPKFELICENDTKLLWGNVQVDNINILQGELEVSFFVSSYCGRENSNEPTLDTAVFRISSTENKFITVGCDSYGYLNSIYNEETYSTGCLTRCYGNRNQIENGTCSGIGCCQVDIPHMMRNISVQVFDFPNSTDSLGCSFSFVVKDGSYNFTISDLDNFPYKMLPLILDWSVGKTCKEDDYACKKNSDCVDVDIDFGYQCKCKEGYEGNPYHPDGCIDGLYECFCPDGQSGNGTKAGGCNRRDVITKIAIGSSAGLIVLFVAVSSLYLTYQKRKLIKLKQKFFQQNGGSILLQQLSTREDTSQSAQIFTEEELKKATKNYDESLIIGKGGFGTVFKGILPDNKIVAVKKSKIIDANQIEQFINEVVVLSQINHRNVVKLLGCCLETEVPSLVYEFVSNGTLFDFIQNCKDKTSNPTWKTRLRIATETAGALSYLHSAASIPIIHRDVKSTNILLDDNYTAKVSDFGASRLVPLDQTEIATMVQGTLGYLDPEYMQTHQLTEKSDVYSFGVVLAELLTGDKPLSFNRPEETISLAMHFLSCIKQDKLFEAIQVGILNDDNKKEIKEVAILAARCLRLRGDERPSMREVAMELDGIRLTEKHPWNDTELNFEESQRLLHEASCSIYNETGDSYNLGYSGYDSLKDQPLIPLDDGR 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00940 716 FunFam Wall-associated receptor kinase 2 353 458 - -
Mepo4g00940 716 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 28 663 IPR045274 GO:0007166
Mepo4g00940 716 Pfam Wall-associated receptor kinase galacturonan-binding 35 95 IPR025287 GO:0030247
Mepo4g00940 716 ProSitePatterns Serine/Threonine protein kinases active-site signature. 505 517 IPR008271 GO:0004672|GO:0006468
Mepo4g00940 716 SUPERFAMILY Protein kinase-like (PK-like) 364 654 IPR011009 -
Mepo4g00940 716 CDD STKc_IRAK 389 657 - -
Mepo4g00940 716 ProSiteProfiles Protein kinase domain profile. 383 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g00940 716 ProSitePatterns Protein kinases ATP-binding region signature. 389 412 IPR017441 GO:0005524
Mepo4g00940 716 Gene3D Transferase(Phosphotransferase) domain 1 459 679 - -
Mepo4g00940 716 SMART serkin_6 383 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g00940 716 FunFam Wall-associated receptor kinase 2 459 677 - -
Mepo4g00940 716 Gene3D Phosphorylase Kinase; domain 1 348 458 - -
Mepo4g00940 716 Pfam Protein kinase domain 385 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00940 Mepo-Chr4 12329100 12332090 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00940 35 716 Receptor kinase-like Gene Family AT1G21230 43.819 0.0 559
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Mepo4g00940 Pkinase 1.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00940 - - gmx:106795446 913.294