Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00933 ATGATGGTGCTCTCTACCAATTCATGTCCAATTAAATTCCTTGTCAACTACATAGATTATGAAACACATTGGATGCTCATTTCAGACCCAGACAATTTCCTTCCGAAAAAGTTTTTGAAACTTAACAATTCATCATTTCTACCATACCGATTTGATTCACAATCCGAAACAGAAATTTCATTCTATAACTGCTCTTTAGCTAGGAATCAACGCATTAGAAACGTCGATCAGTCATTCCTAGATTCACAAGATATGACAACATGTCCGATTTACGCTTCTAATTCCAAGGAGGATGTCCTCAAATTGGACCGTGTATCATGTACCAAGATGTTCCGCGCCAACAAGCCAGTCATGGCATCAAACCTTAGGCGGAATTTTCTCAATTTGAGTTGGCCAAAACCAAATTGTATAGAGTGTGAAGCGAAAGGCAAGCAATGCAAATGGAAGAACAACAACACCAAATATGTCATTGAAAGTTTTGACTGCAACCACAAACATAGAACAATTCAAGTTCCAAAATCTTTTATTTTTGCCACTATAGTGCGATATTCTAAGCCGTTCAACTATCGGTGTCGTTCTGAGCTAGGGTTTTCCAATGGTTTTTGTTTCATGAAATGTAAACTACGTGATTGTATACGATTTAAGGAAAAGTTAGGAGAAGGCACTCACGGAACCGTGTTTAAAGGAAAATTGTCTAGTGAGATTCTGGTGGCTGTTAAGATTCTTAACAATTCACGAGGAGAAGGGAAAAAGTTCATCACTGAAGTGGAATTTATGGGCAAAATTCACCATATCAATGTGATTTGTTTTCTTGCCTTCTGCGTAGAAGGAATTCACCGTGCTCTTGTATACAATTTGTTTCCAATAGGTTTCCACCAGATAACAAGGACCATTTCATGGGGTGGGATAAGTTATGGCATGTTATTGCTAGAAATGGTAGGAGGAAGGAAGAATGTTGACTCATCATCTACAAAAGATTTTCATATTTTATACCCTGAATGGATCCATAGCTTATTGGAAGGAAACATACATATTCAAATTGAAGATGGAGATGATGTTAGAATTGCAAAGAAACTCGCAGTTGTTGGACTTTGGTGCATTCAGTGGAAGCCAATGAACCGTCCATCCATAAAAACTGTCATACAAATGTTCGAAACAATAGATTACAATAAGTTAAGTTTTCCTCTAAACTCGTTTCACTGA 1203 0.3732 MMVLSTNSCPIKFLVNYIDYETHWMLISDPDNFLPKKFLKLNNSSFLPYRFDSQSETEISFYNCSLARNQRIRNVDQSFLDSQDMTTCPIYASNSKEDVLKLDRVSCTKMFRANKPVMASNLRRNFLNLSWPKPNCIECEAKGKQCKWKNNNTKYVIESFDCNHKHRTIQVPKSFIFATIVRYSKPFNYRCRSELGFSNGFCFMKCKLRDCIRFKEKLGEGTHGTVFKGKLSSEILVAVKILNNSRGEGKKFITEVEFMGKIHHINVICFLAFCVEGIHRALVYNLFPIGFHQITRTISWGGISYGMLLLEMVGGRKNVDSSSTKDFHILYPEWIHSLLEGNIHIQIEDGDDVRIAKKLAVVGLWCIQWKPMNRPSIKTVIQMFETIDYNKLSFPLNSFH 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00933 400 ProSitePatterns Protein kinases ATP-binding region signature. 218 240 IPR017441 GO:0005524
Mepo4g00933 400 Gene3D Phosphorylase Kinase; domain 1 208 287 - -
Mepo4g00933 400 SUPERFAMILY Protein kinase-like (PK-like) 205 389 IPR011009 -
Mepo4g00933 400 ProSiteProfiles Protein kinase domain profile. 212 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g00933 400 PANTHER RUST RESISTANCE KINASE LR10-RELATED 212 290 IPR045874 GO:0004672
Mepo4g00933 400 Pfam Protein tyrosine and serine/threonine kinase 212 290 IPR001245 GO:0004672|GO:0006468
Mepo4g00933 400 Gene3D Transferase(Phosphotransferase) domain 1 303 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00933 Mepo-Chr4 12078263 12083466 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00933 304 385 Receptor kinase-like Gene Family AT1G66980 39.326 4.44e-13 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mepo4g00933 PK_Tyr_Ser-Thr 1e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00933 - - gmx:100809236 295.819