Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00932 ATGTTGGGTAAGTCAAAAGGTAATGGACAAGATTTTATTAATGAAGTAGCAACCATTGGAAGGAAACATCATTTGAATTTGTTACAATTACTTGGATTTTGTATTGAAGGATCAAAACATGCTCTTATTTATGAGTTCATGCCTAATGGTTCTCTTGATAAATTTATTTTCTCTAGAGGAGGGAGTATAAACTTAAGCTACAACCAACTTTATGATATTTCAATTGGAATAGCTCGTGGGATTGCTTATCTCCACCATGGATGTGAAATGAAGATTTTACATTTTGATATCAAGCCTCACAATATCCTGCTTGACGAGAACTTTATCCCTAAGATAGCTGACTTTGGATTGGCAAAGCTACATCCGATAGAGAATAGCGTCATCACAATTGGATATATGGCTCCGGAGGTATTCTACAAAAATATAGGGGGAGTGTCATATAAAGCTGATGTTTATAGTTTTGGGATGCTTTTGATGGAGATGGCAAGCAAGAGGAAAAACCTAAACAACGAGGCAGAGCATTCAAGCCAAATTTATTTTCCCTTTTGGATTTATGATCAACTTGGAAAAGTAGGAGAAATAGAAATAGAAAATGTCACAAAAGAGGATATGAAAATAGTTAAGAAAATGATCATGGTCGCTCTTTGGTGTATACAATTGAAGCCAAATGATCGTCCTTCAATGAGTAAAGTAGTGGAGATGCTTGAAGGAGATATTGAAATTCTTGAAATGCCTCCAGAACCAACCATGTACCCAGATGAAGTAATTTCAAGAGATGAAACAACAAACTCAGACCAATCAATGTCCAGCTTCATTAGTTCCAGTGGTTATGGAGAAATCACAAATTATCATCAGAGAATATTTCTTGACACTGCACAAAATGTAATTTGTTAG 894 0.3523 MLGKSKGNGQDFINEVATIGRKHHLNLLQLLGFCIEGSKHALIYEFMPNGSLDKFIFSRGGSINLSYNQLYDISIGIARGIAYLHHGCEMKILHFDIKPHNILLDENFIPKIADFGLAKLHPIENSVITIGYMAPEVFYKNIGGVSYKADVYSFGMLLMEMASKRKNLNNEAEHSSQIYFPFWIYDQLGKVGEIEIENVTKEDMKIVKKMIMVALWCIQLKPNDRPSMSKVVEMLEGDIEILEMPPEPTMYPDEVISRDETTNSDQSMSSFISSSGYGEITNYHQRIFLDTAQNVIC 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00932 297 SUPERFAMILY Protein kinase-like (PK-like) 8 236 IPR011009 -
Mepo4g00932 297 SMART serkin_6 1 235 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g00932 297 FunFam PR5-like receptor kinase 47 246 - -
Mepo4g00932 297 ProSitePatterns Serine/Threonine protein kinases active-site signature. 92 104 IPR008271 GO:0004672|GO:0006468
Mepo4g00932 297 PANTHER RUST RESISTANCE KINASE LR10-RELATED 6 259 IPR045874 GO:0004672
Mepo4g00932 297 Gene3D Phosphorylase Kinase; domain 1 1 47 - -
Mepo4g00932 297 ProSiteProfiles Protein kinase domain profile. 1 242 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g00932 297 Gene3D Transferase(Phosphotransferase) domain 1 48 243 - -
Mepo4g00932 297 Pfam Protein kinase domain 8 233 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00932 Mepo-Chr4 12069943 12070836 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00932 1 283 Receptor kinase-like Gene Family AT5G38280 47.959 2.83e-93 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mepo4g00932 Pkinase 1.2e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00932 - - tpra:123893257 459.529