Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00929 ATGTTTCTACTCCAACAAGGTAACAGCAGCACTACAACAAGTGCTTGTCCACCTTCTTCTTGTGGTAAAATTTCCAACATAAGGTACCCATTTCGATTAAAAGCTGACCCCAAACACTGTGGACATAGCAGGTACGAACTATCTTGTGAAAATAATGTGGCAACTTTATATTTGTATTCGGGAAAATATCATGTGCAATCCATCAACTACAACAATTTCACAATCCGAGTTGCCGATCCTGGAGTCATAGAATCTAACTGCTCTTCACTTCCTCTCTATTGGTTGTCTCGATCTAATTTCTGTGATACCTATAATAACAACGAAAATTGTACAGATCCATACCATGCCCGTTTCGGTGACCAAATTATCATTGCGGGAGAAGTGATTTTTGAGCATATTTTTTACCTGAATTGTACCCAACCAATAACTAACAATTCTAAATATGTGAAAACTACTCCCTGCATAAATTGGCCTTCTTCCAAAAGCTATTATATTTATGCTTTTGCTGGTCATTTAACTGCTGAAGACTTTCAAGTTGGTTGTCACGTGAAATTTGTTGCTCCCAGTTCTTGGAAGGCTTTGCAAGGAAATCAAGTGATTTCCTATGATAAAATACACAAGGCGTTAGTCTATGGATTTGAGATTTCGTGGTTCCGTCTTCCCTGTCAGGATCATTGTGAAAATTCAGAGTTCTGTTACTTCAACTCTACCAGCCAGGACATTGGATGCCTTACGCAAATACAATATTGCTCTTCCACTCTTACGGGACCTAAGGAGAGTACTAATTGTGGGAAATGGTCTGTGATTTTCTTATCGGCTAAAGCTTGGGCCATACATGGTTTCTCCACTCCATTGGTCTCAGAAATCATCAAAGTGTTCTGGACTGGGCTTAAACAAGTTTTCACGAGAGGATTTTTTAAAACACCAGAAAGACCAACCATTGTCAACAATGAACCGAATTCTTTAAAACTAATCGACATTAAAGGTGAATTGGCCATTGGATATTATCTTGTATGGGCCATTGGACATTATATTCTTCCATCAATTCTGGTGGCCAGATTTCTATTTGGGATTACATTTTCTATCGCACTACTGATATCCAGATGGCGAAAAAGACATTGGTCAGTGTATGAATGTATTGAAACATATCTACAACAAAACAACCTCATGCCCATTGGATATTCATACAGAGAAATTAAGAAAATGGCTAAAGGTTTCAAAGATGAATTGGGTAAAGGAGGCTTTGGAACTGTGTTCAAGGGAAACCTACGTAGTGGGCCTTGTGTGGCAATCAAGATGTTGGGTAACGCAAAAGGTAATGGGCAAGATTTTGTCAATGAAGTCACAACCATCGGAAGAATACATCATTTGAATGTGGTACAATTACTTGGATTTTGTATTGAGGGATCAAAACGTGCTTTAGTTTATGAATTCATGCCCAATGGATCTCTTGATAAATTTATTTTCTCTAAAGAAGGGAGCATAAGTTTAAGCTACAACAAAATTTACGATATAGCAATTGGAATAGCTCGTGGGATTGCTTATCTTCACCACGGATGTGAAATGAAGATTTTGCATTTTGATATCAAGCCCCACAATATCCTGCTTGATGAGAACTTCATCCCTAAAATATCAGACTTTGGATTGGCAAAGCTACATCCAATAGAGAATAGCATGATCACAATGACTGCTGCAAGAGGTACGATTGGATACATGGCTCCTGAGTTGTTCTACAAAAATATTGGGGGAGTGTCTTATAAGGCTGATGTTTATAGTTTTGGGATCTTTTGA 1791 0.3814 MFLLQQGNSSTTTSACPPSSCGKISNIRYPFRLKADPKHCGHSRYELSCENNVATLYLYSGKYHVQSINYNNFTIRVADPGVIESNCSSLPLYWLSRSNFCDTYNNNENCTDPYHARFGDQIIIAGEVIFEHIFYLNCTQPITNNSKYVKTTPCINWPSSKSYYIYAFAGHLTAEDFQVGCHVKFVAPSSWKALQGNQVISYDKIHKALVYGFEISWFRLPCQDHCENSEFCYFNSTSQDIGCLTQIQYCSSTLTGPKESTNCGKWSVIFLSAKAWAIHGFSTPLVSEIIKVFWTGLKQVFTRGFFKTPERPTIVNNEPNSLKLIDIKGELAIGYYLVWAIGHYILPSILVARFLFGITFSIALLISRWRKRHWSVYECIETYLQQNNLMPIGYSYREIKKMAKGFKDELGKGGFGTVFKGNLRSGPCVAIKMLGNAKGNGQDFVNEVTTIGRIHHLNVVQLLGFCIEGSKRALVYEFMPNGSLDKFIFSKEGSISLSYNKIYDIAIGIARGIAYLHHGCEMKILHFDIKPHNILLDENFIPKISDFGLAKLHPIENSMITMTAARGTIGYMAPELFYKNIGGVSYKADVYSFGIF 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00929 596 Gene3D Transferase(Phosphotransferase) domain 1 479 596 - -
Mepo4g00929 596 FunFam serine/threonine-protein kinase PBS1-like 376 478 - -
Mepo4g00929 596 SMART serkin_6 404 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g00929 596 Gene3D Phosphorylase Kinase; domain 1 381 478 - -
Mepo4g00929 596 ProSitePatterns Serine/Threonine protein kinases active-site signature. 524 536 IPR008271 GO:0004672|GO:0006468
Mepo4g00929 596 ProSitePatterns Protein kinases ATP-binding region signature. 410 432 IPR017441 GO:0005524
Mepo4g00929 596 PANTHER RUST RESISTANCE KINASE LR10-RELATED 378 595 IPR045874 GO:0004672
Mepo4g00929 596 Pfam Wall-associated receptor kinase galacturonan-binding 16 79 IPR025287 GO:0030247
Mepo4g00929 596 FunFam Os07g0541700 protein 479 568 - -
Mepo4g00929 596 SUPERFAMILY Protein kinase-like (PK-like) 390 595 IPR011009 -
Mepo4g00929 596 Pfam Protein tyrosine and serine/threonine kinase 406 595 IPR001245 GO:0004672|GO:0006468
Mepo4g00929 596 ProSiteProfiles Protein kinase domain profile. 404 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00929 Mepo-Chr4 12031002 12036711 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00929 346 595 Receptor kinase-like Gene Family AT4G18250 50.000 2.53e-76 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mepo4g00929 PK_Tyr_Ser-Thr 4.4e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00929 - - tpra:123893257 760.37