Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00928 ATGATAGTGCTATCTACCAGTTCAGGTCCAGTCAAATTCTATGTATCTGATATTGACTACGAATCACACTCGATGTCAATATCAGACCCAGACAATTGCCTTTCGGAAAAGTTTTTGAAACTTTACAATTCATCATTTCTACCTTACCGATTTGTTTCAAATTCAGATGAAAAATATTCCTTCTTCAACTGCTCTTCAGTTAGGAAACAACACCTGAGAAACGAATATCAGATATACCAAGAGTCACAAGATATGATCACTTGTCCAATTTACGCTACATATTCCCAACAAGATATCGTCGATTTGGACCTTTTATCGTGTACCAAGATGTTCGACGTCAACTCGTCAATCATGAATTCGGGCCCGAAGTATAATATTTTCAATTTGAGTTGGCCCAAACCAAATAGTGCAGAGTGTAAAGATAAAGGTTCAATTATACTGGGGTTGTCCACCGTTTCATTTATAAAGATTTATCTACATTTCAGAGAAAAAGAAGAAGATCAAGTTAGAATTGATAAGTTCTTAGAGGACTATAGAGCACAAAAGCCTGCCAGATTTTCATACTCGGATATAAAAAGAATTACAAGTAGGTTTAAGGAAAAGTTAGGAGAAGGGGCTCATGGAACGGTGTTTAAAGGAAAACTCTCTAGTGAGATTCTGGTGGCGGTGAAGATTCTCAACAATACACAGGGAGATGGGAAAGAGTTCATCACTGAAGTGGAAATTATGGGCAAAATTCACCATATCAATGTGGTTCGTTTGCTTGGCTTTTGCACAGAAGGAATTCACCGTGCTCTTGTATATAACTTTTTTCCAAAAGGTTCCTTACAAAGCTTCATATTTTCACCGGATAACAAGGATCGTTTCATGGGGTGGGAGAAGATACAACAAATTAGTCTTGGTATAGCAAAAGGAATTGAGTATCTTCATGAGGGTTGTAGCCATCCAATCCTTCACTCTGACATCAACCCTCACAATGTTTTGCTAGATGACTCCTTCACTCCAAAGATTTCTGACTTTGGGCTCGCCAAATTATGTGCCAAGAATATTAGTGTAGTGTCCATGACAGCTGCTAGGGGAACTTTGGGATATATGACACCATTCTTAAGACACAATGTTAAGACCATATTTCACAACATAGCCAAACTTATTTCAAAATACGTATGA 1167 0.377 MIVLSTSSGPVKFYVSDIDYESHSMSISDPDNCLSEKFLKLYNSSFLPYRFVSNSDEKYSFFNCSSVRKQHLRNEYQIYQESQDMITCPIYATYSQQDIVDLDLLSCTKMFDVNSSIMNSGPKYNIFNLSWPKPNSAECKDKGSIILGLSTVSFIKIYLHFREKEEDQVRIDKFLEDYRAQKPARFSYSDIKRITSRFKEKLGEGAHGTVFKGKLSSEILVAVKILNNTQGDGKEFITEVEIMGKIHHINVVRLLGFCTEGIHRALVYNFFPKGSLQSFIFSPDNKDRFMGWEKIQQISLGIAKGIEYLHEGCSHPILHSDINPHNVLLDDSFTPKISDFGLAKLCAKNISVVSMTAARGTLGYMTPFLRHNVKTIFHNIAKLISKYV 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00928 388 ProSiteProfiles Protein kinase domain profile. 196 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g00928 388 PANTHER RUST RESISTANCE KINASE LR10-RELATED 166 374 IPR045874 GO:0004672
Mepo4g00928 388 Gene3D Transferase(Phosphotransferase) domain 1 271 375 - -
Mepo4g00928 388 FunFam S-receptor-like serine/threonine-protein kinase 164 270 - -
Mepo4g00928 388 Gene3D Phosphorylase Kinase; domain 1 170 270 - -
Mepo4g00928 388 SUPERFAMILY Protein kinase-like (PK-like) 179 367 IPR011009 -
Mepo4g00928 388 FunFam Os07g0541700 protein 271 361 - -
Mepo4g00928 388 Pfam Protein tyrosine and serine/threonine kinase 198 367 IPR001245 GO:0004672|GO:0006468
Mepo4g00928 388 ProSitePatterns Protein kinases ATP-binding region signature. 202 224 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00928 Mepo-Chr4 12028688 12030073 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00928 161 367 Receptor kinase-like Gene Family AT1G66980 48.077 5.66e-59 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Mepo4g00928 PK_Tyr_Ser-Thr 7.5e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00928 - - gmx:100809236 482.256