Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00914 ATGGACGGTGAACGAAAAATCGCCGCCGTTCCTCAAGGGGATGGGCCCATTGATAGTGTTGAGAAAGTTAGAGCAGCATTACATGGGAGGACTACTGGTCCTACAAGACGTTCTACAAAAGGGCAATGGACTCCTGAGGAGGATGAGACATTGCGAAAGGCTGTTCAGCGTTTCCAAGGAAAAAATTGGAAAAAAATAGCGGAGTGTTTCAAGGATAGAACTGATGTGCAATGCTTACATAGGTGGCAGAAAGTGTTGAATCCTGAACTTGTTAAAGGGCCATGGTCTAAAGAGGAAGATGACGTGATGATTGAATTGGTGAACAAATATGGGCCTAAGAAGTGGTCAACTATCGCCCAACATTTACCTGGACGTATTGGGAAGCAATGTCGAGAAAGGTGGCATAATCATCTTAATCCTGCTATAAACAAGGAAGCATGGACACAGGAAGAGGAGTTGGCTCTAATACGTGCTCATCAGATTTATGGGAACAAGTGGGCGGAATTAACGAAGTTTTTGCCTGGAAGGACAGACAATGCTATTAAAAACCACTGGAACAGTTCAGTCAAAAAGAAATTGGATTCTTACTTGGCATCAGGCTTGCTTACTCAATTGCAATCTGTACCTCATGTTGGAAATCCAAGCCAATCAATGGTTGCAACATCTTCAAGGTCGCAATGTAATGAAGATGAGAATGCTCTTCAGCGGATTGAGGGAGATGAAGTTTTAGAGTGTAGTCATGAGTCAGCTAATGCTCTCCACTTTCCATCGACTAGAGAGATAACCAGTGTTGACTTAGAACCTGAAGAGGAGAATAGACCAAATGAAGAATGTAGTATTGCGATGGATCATAGTCCAAGTCAAGCATCTTGTTCAGAGCCATATCTTGTATCAATTGACGACTCAATTGACGATGTTACTATATGCATTCCAGAAATTGCTCATCATGAGGCTTGCTCTTCTGAATTCAATGACCAATACTCACATGAACCTGGAAATTCCATAAATGAGGATCGCCACCTTAACTTACATTCCTTACCCAATATTTCATCAATGGACTTAGGGAAGGACTCCCCGCAGATGCAAAGAGATTGTACAGATCCTAGTGGAATACGTGACTTGGTGATTGTTCCGTATCAGACTTCAGTGGGTTTAGCTGCTTCAACGCACATGGAAACTACATCTATGGATTCTGCTAAACCAGATCATATGTTGATATCTGATGACGAATGTTGCAGAGTCCTGTTTTCAGAGGCAAATAATGATAGACGTTTTATCCATGGAGATTATAATAATGGTGTTGGTACTGTTGAATTTTCTGGTCACCCTGCATTTGTTTGTCAATCATGTCATATTCCGATTTTCGAAACTGGTGGAACCTCAACTCTGCCATTAACTTGTCCTCAGTGTTCTAATAATTTCAAAGGAATGTCATCCTCCCAATCTAACCATCCAGTTCATTCTGCTGAGCCTGAGAATCAACAGTTTGTCTCCAGAGCACCTGATAACTTCACTTATGCCAATGACACATCCAGTTCTCGTATTGATGCCATGGAGAGTGCAGTATTGCAAGATGTTAATCAAAACTGTTGTCCAACAGATGAAAAGCCAAAGCCAAACGTGCACCCAGGAAAGGAGGGCAATGGAGCACTATGTTATGAACCTCCCCGTTTTCCAAGCTTGGATATTCCTTTCCTGAGTTGCGATCTTGTACAATCTGGGGGTGATATGCAACAGGAATTTAGTCCTCTAGGTATCCGCCAGTTTATGATGTCTTCTATGAACTGTATGACTCCGTCAAGGTTGTGGGACTCGCCTTCTCGCGATGATAGTCCAGAAGCATTATTGAAAAGTGCAGCTAAAACTTTTGCGGGTACACCATCAATATTAAAGAAACGATGCCGAGATTTGTTATCGCCACTTTCAGATAAAAGAATAGGTAAGAAACATGAGACTGACATGGCATCCTCTTTGTCCAAAGCTTTTTCTAGTTTGGAACCAGATATACTTTCTCCATCTTCATTGCAAAAGCAAAACTCTGGGGCTTCTGGTTTTGATGACGATAAAGAAAATTGCGGACAAGCTGATAAAGGCAAACAAGTAGAGGAGACAAATGAATCGGCAATTTTAGAACAAAAGAAGTCTCAAAGAGATGCTCTTGACAGTAATTCTCCTGGTAAGGTTAAGCAACGGCATTTAGACGTTGATTCGAAAATGAAGATTGATGCTGCTGCTGAGATTGTGCAACAATCTTCTGGAGTTTTGTCTGAACATGATAGGAACGACCTTTCATTATACTCATCTGATCAAGTTGGTTTTAGAGACAGAGTTCTAGGTTCTAGTGTTAGAACTCCCAGAAACTTGAACAATAGGAGCTCGGAAACAGCTCCAAACCAGAGCATTCCTTCAAAATTATCTTCTGAGAATCCATGCAGGTTTAGCTCTCCTTGTATTCGTGCAAAGGAGCATGAAAATCTTACAGTTTCTGTTAATCGTGTAAAAGCTCCAGGGGAGAATTCAGGGGATCAAAGTAAAAATGACGGAGGTTTTGAAACTTACAGCATATTTGGCGGAACACCTTTCATGAAAGGTTTTGAATCACCATCTGCATGGAAATCATCTCCTTGGTTCAGGAATACTTTTCTCTGTAGTCCCAATACGGAAATTAAAATTGAGGATTTTGGATTTTTCAAGAGCCCAGAAGGTGAAAGAAGCTACGACGCTATCGGGTTGTTAAAACAAGTCGGGGAACAAACTGCTGCTACATATGAAAATGCACAGGAGCTTTTGAAAAATGATACTCCTAAAGCAGTACCTAAAGATGCATCCAGAAACGATAATAGTCCTAGCACGAACAATTCTAAGTTGACTTCAAATCCTTTGGTTGAGCGACGCATGCTTGACTTTAGTGAATGTGGAACACCAGAAAAGGGTGATAGCAGCAAATCCTCAGATAGTCGGCTATGA 2967 0.4135 MDGERKIAAVPQGDGPIDSVEKVRAALHGRTTGPTRRSTKGQWTPEEDETLRKAVQRFQGKNWKKIAECFKDRTDVQCLHRWQKVLNPELVKGPWSKEEDDVMIELVNKYGPKKWSTIAQHLPGRIGKQCRERWHNHLNPAINKEAWTQEEELALIRAHQIYGNKWAELTKFLPGRTDNAIKNHWNSSVKKKLDSYLASGLLTQLQSVPHVGNPSQSMVATSSRSQCNEDENALQRIEGDEVLECSHESANALHFPSTREITSVDLEPEEENRPNEECSIAMDHSPSQASCSEPYLVSIDDSIDDVTICIPEIAHHEACSSEFNDQYSHEPGNSINEDRHLNLHSLPNISSMDLGKDSPQMQRDCTDPSGIRDLVIVPYQTSVGLAASTHMETTSMDSAKPDHMLISDDECCRVLFSEANNDRRFIHGDYNNGVGTVEFSGHPAFVCQSCHIPIFETGGTSTLPLTCPQCSNNFKGMSSSQSNHPVHSAEPENQQFVSRAPDNFTYANDTSSSRIDAMESAVLQDVNQNCCPTDEKPKPNVHPGKEGNGALCYEPPRFPSLDIPFLSCDLVQSGGDMQQEFSPLGIRQFMMSSMNCMTPSRLWDSPSRDDSPEALLKSAAKTFAGTPSILKKRCRDLLSPLSDKRIGKKHETDMASSLSKAFSSLEPDILSPSSLQKQNSGASGFDDDKENCGQADKGKQVEETNESAILEQKKSQRDALDSNSPGKVKQRHLDVDSKMKIDAAAEIVQQSSGVLSEHDRNDLSLYSSDQVGFRDRVLGSSVRTPRNLNNRSSETAPNQSIPSKLSSENPCRFSSPCIRAKEHENLTVSVNRVKAPGENSGDQSKNDGGFETYSIFGGTPFMKGFESPSAWKSSPWFRNTFLCSPNTEIKIEDFGFFKSPEGERSYDAIGLLKQVGEQTAATYENAQELLKNDTPKAVPKDASRNDNSPSTNNSKLTSNPLVERRMLDFSECGTPEKGDSSKSSDSRL 988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00914 988 Gene3D - 39 91 - -
Mepo4g00914 988 Gene3D - 92 143 - -
Mepo4g00914 988 MobiDBLite consensus disorder prediction 941 960 - -
Mepo4g00914 988 CDD SANT 146 186 IPR001005 -
Mepo4g00914 988 MobiDBLite consensus disorder prediction 689 734 - -
Mepo4g00914 988 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 87 142 IPR017930 -
Mepo4g00914 988 CDD SANT 43 86 IPR001005 -
Mepo4g00914 988 MobiDBLite consensus disorder prediction 929 988 - -
Mepo4g00914 988 SMART sant 39 88 IPR001005 -
Mepo4g00914 988 SMART sant 91 140 IPR001005 -
Mepo4g00914 988 SMART sant 143 191 IPR001005 -
Mepo4g00914 988 CDD SANT 94 138 IPR001005 -
Mepo4g00914 988 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 143 193 IPR017930 -
Mepo4g00914 988 FunFam Transcriptional activator Myb isoform A 39 91 - -
Mepo4g00914 988 FunFam Transcription factor MYB3R-2 145 207 - -
Mepo4g00914 988 ProSiteProfiles Myb-like domain profile. 87 138 IPR001005 -
Mepo4g00914 988 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 35 86 IPR017930 -
Mepo4g00914 988 SUPERFAMILY Homeodomain-like 89 185 IPR009057 -
Mepo4g00914 988 Gene3D - 145 207 - -
Mepo4g00914 988 FunFam Transcriptional activator Myb isoform A 92 144 - -
Mepo4g00914 988 PANTHER MYB PROTEIN-RELATED 40 113 - -
Mepo4g00914 988 ProSiteProfiles Myb-like domain profile. 139 189 IPR001005 -
Mepo4g00914 988 MobiDBLite consensus disorder prediction 669 734 - -
Mepo4g00914 988 Pfam Myb-like DNA-binding domain 40 86 IPR001005 -
Mepo4g00914 988 Pfam Myb-like DNA-binding domain 92 138 IPR001005 -
Mepo4g00914 988 Pfam Myb-like DNA-binding domain 144 186 IPR001005 -
Mepo4g00914 988 SUPERFAMILY Homeodomain-like 38 100 IPR009057 -
Mepo4g00914 988 MobiDBLite consensus disorder prediction 782 810 - -
Mepo4g00914 988 ProSiteProfiles Myb-like domain profile. 35 86 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00914 Mepo-Chr4 11818602 11825607 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00914 16 978 MYB Transcription Factor Family AT4G32730 41.659 0.0 633
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo4g00914 Myb_DNA-binding 2.1e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00914 - K09420 aprc:113848458 1283.09