Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00896 ATGGAAAAGGTTGTTGGAGGAAAGTATAGGATTGGTAGGAAAATTGGTAGTGGATCATTTGGTGAAATTTATATTGGTGCACATGTTGTGACTTCTGAGCTTGTGGCCATTAAGAAGGAGAAGAAGAAAACTCAACAACCACAGCTACTATATGAGGCAAAGTTATATAATATTCTTAAAGGAGGAAGTGGTATTCCAAGAATGAAATGGTTTGGTACTGATGGAGACTACAATGTTCTAGTTCTTGAACTTATGGGGCCAAGTCTCGACGACCTCCTTTACTACTGTAGTGGGAAGTTTACGCTAAAATCGGTTTTGATGTTGGCCGATCAAATGCTTACGAGGATAGAGTATTTACATTCCAAGGGATTACTACACAGAGATATCAAACCGGATAACTTTCTTATGGGTCTTGGGAAGAAAGCAAATCAGGTTTGTATGATTGATTTTGGACTTTCAAAAGGATACAGGGATCCTATCAGTTACAAGCATATCCCTTACAGAGAAAACAAAAACTTAACAGGAACTGCACGTTATGCAAGTAGCAATACTCACAAAGGAATTGAGCAAAGCCGCAGAGATGATTTGGAGTCTCTTGGCTATGTTCTTTTGTACTTTTTAAGAGGAAGCCTTCCTTGGCAAGGTCTGCAAGCTGCCACCAGAATGCAAAAATATGAAAAAATATGCGAAACAAAGTTAAACACTCCCATTGAGGTACTTTGCAAGTCATGTCCCGTGGAGTTTGCTTCTTACTTTCATTATTGCCGCTCCTTGACATTTGATCAACGACCAGATTATGGATATTTGAAGCGCCTATTTCGTGAATTGTTCACTTCCAAAGGATATGCTGCTGACTATTTATATGACTGGACGATTTTAAAATATCAGGAGATTCAACAGATAAAGGAACAAAATCAATCAATAGCTCCAGTTGCCGTGCCTTCCAGTCTTGAACCAGGGGATGTGGATGAGCATACGGAATACAATGATTGTACTCAAAATGCCGTGCTAAAACCAAAAATCTATACCGACCGTCCACGTGTTTGTATGAAGCTCAGGGTAGCTAACGTCGACAATCTTGATGATGAGATTCAAACAGATAAACAAAATGTGAATACTGATTCACCTATTTCCACTGTCATGCCTACGGAAGATGTTCCAAAACCAGAAACGACTGTGGAAACCTCAAACCCGGATGACGTGTTAGGGAGTAAATGTGGTGCTTCTGATGACTTGGTTCCTTCACTACGCCGAGTTCCATCCATCAATTAG 1272 0.4002 MEKVVGGKYRIGRKIGSGSFGEIYIGAHVVTSELVAIKKEKKKTQQPQLLYEAKLYNILKGGSGIPRMKWFGTDGDYNVLVLELMGPSLDDLLYYCSGKFTLKSVLMLADQMLTRIEYLHSKGLLHRDIKPDNFLMGLGKKANQVCMIDFGLSKGYRDPISYKHIPYRENKNLTGTARYASSNTHKGIEQSRRDDLESLGYVLLYFLRGSLPWQGLQAATRMQKYEKICETKLNTPIEVLCKSCPVEFASYFHYCRSLTFDQRPDYGYLKRLFRELFTSKGYAADYLYDWTILKYQEIQQIKEQNQSIAPVAVPSSLEPGDVDEHTEYNDCTQNAVLKPKIYTDRPRVCMKLRVANVDNLDDEIQTDKQNVNTDSPISTVMPTEDVPKPETTVETSNPDDVLGSKCGASDDLVPSLRRVPSIN 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00896 423 ProSiteProfiles Protein kinase domain profile. 9 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g00896 423 Gene3D Transferase(Phosphotransferase) domain 1 1 336 - -
Mepo4g00896 423 FunFam CK1 family protein kinase 1 327 - -
Mepo4g00896 423 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Mepo4g00896 423 Pfam Protein kinase domain 9 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g00896 423 ProSitePatterns Protein kinases ATP-binding region signature. 15 39 IPR017441 GO:0005524
Mepo4g00896 423 MobiDBLite consensus disorder prediction 365 423 - -
Mepo4g00896 423 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Mepo4g00896 423 SMART serkin_6 9 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g00896 423 PANTHER CASEIN KINASE-RELATED 7 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00896 Mepo-Chr4 11588498 11593213 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00896 8 213 MAP Kinase Kinase Kinase AT1G54960 29.864 1.34e-16 80.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Mepo4g00896 Pkinase 4.9e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00896 K08960 - gmx:100782913 584.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07612 3 89437480 89443440 Mepo4g00896 4 11588498 11593213 PCT