Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00894 ATGGCCAAAATCACTTTAGGAACAACCCAAGAGGCTGCTCAACCTAATTGCATCCAGGCTCTAATTGTTGAATTCATTGTCACCTTTCTCTTTGTTTTTGCTGGTGTTGCTTCTAAAATGGCTGTTGATAAGCTAAGTGGAGATGGTTTACTGGGATTATTTTTTGTGGCTATGGCACAAGCTCTTCTGGTGGCCGTAATGATATCCGCCGGTCACGTATCCGGTGGCCATTTGAATCCCGCCGTGACCTTGGGCCTCCTTGTTGGCGGCCACATCACCGTCGACCGTTCTATCCTATATTGGATTGATCAACTTATAGCATCTGCAGGAGCTTGCTATCTTCTTCATTACCTCAGTGGTGGATTAACAATTACGGTTCATACACTTAAAAGTGGAGTAGGGTGTACTCAAGGAGTAGTTTGGGAAATTGTGTTGACATTCTCTTTGTTGTTCACCGTGTATGCAACTATGGTTGATCCAAAGAAAGGAGGACTTGCTGGACTTGGCCCAATTTTGGTTGGATTTGTTGTAGGGGCTAACATCTTGGCTGGCGGGGCTTTCGCAAGTGCTTCCATGAATCCAGCAAGATCTTTTGGGCCTGCTTTGGTTAGTAGAAATTGGACTGACCAATGGGTTTTTTGGGTAGGGCCTCTCATTGGTGGTGGGCTTGCTGGTTTCATTTATGAGAATTTCCTCATCGATAAAACTCATGTTCCTCTGCTTGTGGATGAAGACAACTACTAA 744 0.4489 MAKITLGTTQEAAQPNCIQALIVEFIVTFLFVFAGVASKMAVDKLSGDGLLGLFFVAMAQALLVAVMISAGHVSGGHLNPAVTLGLLVGGHITVDRSILYWIDQLIASAGACYLLHYLSGGLTITVHTLKSGVGCTQGVVWEIVLTFSLLFTVYATMVDPKKGGLAGLGPILVGFVVGANILAGGAFASASMNPARSFGPALVSRNWTDQWVFWVGPLIGGGLAGFIYENFLIDKTHVPLLVDEDNY 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00894 247 SUPERFAMILY Aquaporin-like 12 241 IPR023271 -
Mepo4g00894 247 PRINTS Major intrinsic protein family signature 141 159 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo4g00894 247 PRINTS Major intrinsic protein family signature 174 196 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo4g00894 247 PRINTS Major intrinsic protein family signature 59 83 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo4g00894 247 PRINTS Major intrinsic protein family signature 96 115 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo4g00894 247 PRINTS Major intrinsic protein family signature 19 38 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo4g00894 247 PRINTS Major intrinsic protein family signature 211 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo4g00894 247 ProSitePatterns MIP family signature. 77 85 IPR022357 -
Mepo4g00894 247 FunFam Probable aquaporin TIP1-1 2 244 - -
Mepo4g00894 247 CDD MIP 19 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo4g00894 247 Gene3D Glycerol uptake facilitator protein. 2 243 IPR023271 -
Mepo4g00894 247 Pfam Major intrinsic protein 14 228 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mepo4g00894 247 PANTHER AQUAPORIN-8 4 237 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00894 Mepo-Chr4 11579214 11582961 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00894 1 245 Major Intrinsic Protein MIP AT2G25810 74.694 2.90e-125 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00894 K09873 - gmx:100793258 389.808