Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00891 ATGAGAGTTTCACCACAAAATTCAGAAACCGAGAGCACCTCAAATTCATCACCATACACAACAAACTCAATTCAAGACCAAGAATCCAACAACAAGAAGGTGAAACGCAACCGTGATTCCAACAAACACCCCGTCTACCGAGGCGTTCGCATGAGAAATTGGGGAAAGTGGGTGTCTGAAATCCGCGAGCCACGCAAGAAATCGCGGATTTGGTTAGGCACTTTCCCCACGGCTGAAATGGCTGCTAGAGCGCATGACGCTGCTGCGCTCTGCGTTAAAGGAAAATCCGCCATTCTAAATTTCCCTCAGCTCATGGATTCTCTTCCAAAACCTGCTTCTTTAGCCCCTCGCGATGTTCAGGCCGCGGCGGCTAAAGCAGCTCAAATGGACATTAGCAAATTTGAACCATCATCATCATCTTCTTCATTGTCATCGTTGTCATCTTCACTGACAACGATGTCAACATCAACAAGTCTGTTAATGAAAACAACAAAAACGTTGTCTTCATCAGCTGACTTGTCAGCTACTTCGGAAGAACTTAGTGAGATTATTGAGCTACCTACTTTGGAAAACGGTTATGATGATGTTGGGAAAGAGGAGTTTCTGTATGTTGACTCACTCTCACAAGACTATGCTTGGATGATGTATCAGCAACCAATGACATGGCTACAAACAACACAAGAAGAAGGTTGTTGTGTTGGTGATGATGGACTTGTTAATAATGGTGTTGTAACTAGTTTCGACAGTTTTATGTGGAATTACTAG 765 0.4366 MRVSPQNSETESTSNSSPYTTNSIQDQESNNKKVKRNRDSNKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTAEMAARAHDAAALCVKGKSAILNFPQLMDSLPKPASLAPRDVQAAAAKAAQMDISKFEPSSSSSSLSSLSSSLTTMSTSTSLLMKTTKTLSSSADLSATSEELSEIIELPTLENGYDDVGKEEFLYVDSLSQDYAWMMYQQPMTWLQTTQEEGCCVGDDGLVNNGVVTSFDSFMWNY 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00891 254 ProSiteProfiles AP2/ERF domain profile. 45 102 IPR001471 GO:0003700|GO:0006355
Mepo4g00891 254 MobiDBLite consensus disorder prediction 29 45 - -
Mepo4g00891 254 PRINTS Ethylene responsive element binding protein signature 68 84 IPR001471 GO:0003700|GO:0006355
Mepo4g00891 254 PRINTS Ethylene responsive element binding protein signature 46 57 IPR001471 GO:0003700|GO:0006355
Mepo4g00891 254 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 25 191 - -
Mepo4g00891 254 SMART rav1_2 45 108 IPR001471 GO:0003700|GO:0006355
Mepo4g00891 254 FunFam Ethylene-responsive transcription factor 2 44 103 - -
Mepo4g00891 254 MobiDBLite consensus disorder prediction 1 45 - -
Mepo4g00891 254 Pfam AP2 domain 44 94 IPR001471 GO:0003700|GO:0006355
Mepo4g00891 254 SUPERFAMILY DNA-binding domain 45 103 IPR016177 GO:0003677
Mepo4g00891 254 MobiDBLite consensus disorder prediction 1 28 - -
Mepo4g00891 254 Gene3D AP2/ERF domain 45 104 IPR036955 GO:0003700|GO:0006355
Mepo4g00891 254 CDD AP2 46 102 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00891 Mepo-Chr4 11559970 11560850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00891 7 228 AP2-EREBP Transcription Factor Family AT5G11590 53.744 8.10e-64 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo4g00891 AP2 2.3e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00891 K09286 - gmx:100305349 224.942
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g00891 4 11559970 11560850 Mepo4g00891 4 11559970 11560850 ECH
Mepo3g07621 3 89496684 89497876 Mepo4g00891 4 11559970 11560850 PCT