Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00881 ATGCCTCCTCAACTTCGAACCAGAAAAACCAAACAACAAAACCCGAATCCGAATCAAAACCCGAACCCGATCGCTAAACCCGAACCCGCTACACGAGGTAGAAGAGGTAGACCTGCTAGAAATCGTAACAACAACACCATCGCCGCCGCAGCCGCACGTGATCAAGTACAAGAACAACAACAACAACCACAAAACGAACAACCTCACGTGCCGGAACAAATTAGGGTTTCTAATAAGCAAGAGAATATGGATGATGACTGTGATAGCGGCGGTGGGAGAACCGCCGCTGATAAAGGTCCGGTGGCTGAAGATGAAGGGAGTACACCGCCTATTCCTGAAAAAGTTCAGGTGGGTGGTTCACCGATGTACAGAGTAGATAGGAAGCTTGGGAAAGGTGGGTTTGGACAAGTTTATGTTGGTCGTCGTATTGGTGCCGGAGCCGGTGCTGTTGAGGTGGCTTTGAAATTTGAGCATAAAACCAGCAAAGGGTGTAATTATGGACCTCCTTACGAGTGGCAGGTTTACAATGTATTAGGAGGTAGCCATGGTGTCCCACGAGTTCATTACAAGGGACGACAAGGTGATTGGTATGTCATGGTCATGGATATTCTTGGCCCTAGTTTATGGGATGTTTGGAATAACAAGACACACACGATGTCTGCTGAAATGGTGTCGTGTATAGCAATCGAGGCTGTTTCCATATTAGAGAAGATGCATTCTAGAGGATACGTGCATGGTGATGTAAAACCTGAGAACTTTTTGCTTGGCCCTCCGGGAACTCATGAAGAGAAAAAGCTTTTTCTGGTTGATCTTGGTTTAGCAACTCGTTGGCGTGATAATTCGACCGGTCTTCATGTTGATTACGATCAGCGTCCAGATGTATTTAGGGGAACGGTTCGTTATGCTAGTGTACATGCTCATCTTGGTAGGACAGGTAGCAGAAGAGATGATTTGGAATCTCTTGCATACACACTAATTTTCCTTCTTCGCGGACGGCTACCCTGGCAAGGATACCAGGGTGAAAATAAAGGATTTCTTGTTTGCAAGAAGAAAATGGCCACCTCGCCAGAAAATATGTGTATCCTCTGTCCCGCACCTTTTCGGCAGTTTATTGAGTACGTGGTGAATTTGAAGTTCGACGAAGAACCAAATTATGCCAAATATATATCACTTTTCGATGGAATTGTTGGTCCAAATCCAGACATTAGACCCATAAACACTGACGGTGCTCAGAAGCTTATTTATCAGGTTGGACAGAAGAGAGGACGGTTGACCATGGAAGGAGATGATGATGAGCAGCCAAAGAAGAAAGTCAGAATGGGAATGCCAGCAACACAATGGATTAGTGTGTACAATGCTCGCCGACCTATGAAGCAAAGGTACCATTACAATGTTGCTGATATGCGGTTGTCCCAACACATCGAAAAGGGATATGAAGATGGGTTATTTATCAGTAGTGTAGGTTGTTGTTCTAACCTTTGGGCACTGATTATGGATGCCGGCACTGGTTTCACTGCACAAGTTTATGAACTCTCATCCTTCTTCCTTCACAAGGAATGGATTATGGAACAGTGGGAAAAAAATTATTATATTAGTGCCATAGCAGGATCTAATAGTGGGAGCTCGTTGGTTGTAATGTCGAAAGGGACCCAATACTTGCAGCAATCCTATAAGGTCAGTGAATCATTTCCGTTCAAGTGGATTAATAAAAAATGGAAAGAAGGATTTTTCGTCACTGCTATGGCCACTGCTGGAAGTAGATGGGCAATTGTTATGTCCCGTGGTGCTGGATTTTCAGATCAGGTTGTGGAGCTTGATTTCCTGTATCCTAGTGAAGGTATTCATCGAAGGTGGGACAATGGTTACCGCATTACTTCAACTGCTGCTACATATGACCAGGCTGCTCTTGTTCTTAGTATTCCAAGAAGAAAACCGACTGATGAAACTCAAGAAACACTTCGCACATCTGACTTTCCTAGTACTCATGTCAAGGAAAAATGGGCAAAGAACCTCTATATTGCATCTATTTGTTACGGAAGAACTGTTTCATGA 2052 0.4415 MPPQLRTRKTKQQNPNPNQNPNPIAKPEPATRGRRGRPARNRNNNTIAAAAARDQVQEQQQQPQNEQPHVPEQIRVSNKQENMDDDCDSGGGRTAADKGPVAEDEGSTPPIPEKVQVGGSPMYRVDRKLGKGGFGQVYVGRRIGAGAGAVEVALKFEHKTSKGCNYGPPYEWQVYNVLGGSHGVPRVHYKGRQGDWYVMVMDILGPSLWDVWNNKTHTMSAEMVSCIAIEAVSILEKMHSRGYVHGDVKPENFLLGPPGTHEEKKLFLVDLGLATRWRDNSTGLHVDYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMATSPENMCILCPAPFRQFIEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPINTDGAQKLIYQVGQKRGRLTMEGDDDEQPKKKVRMGMPATQWISVYNARRPMKQRYHYNVADMRLSQHIEKGYEDGLFISSVGCCSNLWALIMDAGTGFTAQVYELSSFFLHKEWIMEQWEKNYYISAIAGSNSGSSLVVMSKGTQYLQQSYKVSESFPFKWINKKWKEGFFVTAMATAGSRWAIVMSRGAGFSDQVVELDFLYPSEGIHRRWDNGYRITSTAATYDQAALVLSIPRRKPTDETQETLRTSDFPSTHVKEKWAKNLYIASICYGRTVS 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00881 683 SUPERFAMILY Protein kinase-like (PK-like) 123 398 IPR011009 -
Mepo4g00881 683 CDD STKc_CK1 122 392 - -
Mepo4g00881 683 ProSitePatterns Serine/Threonine protein kinases active-site signature. 243 255 IPR008271 GO:0004672|GO:0006468
Mepo4g00881 683 MobiDBLite consensus disorder prediction 1 118 - -
Mepo4g00881 683 ProSitePatterns Protein kinases ATP-binding region signature. 129 155 IPR017441 GO:0005524
Mepo4g00881 683 MobiDBLite consensus disorder prediction 40 77 - -
Mepo4g00881 683 MobiDBLite consensus disorder prediction 1 19 - -
Mepo4g00881 683 MobiDBLite consensus disorder prediction 78 92 - -
Mepo4g00881 683 PANTHER CASEIN KINASE-RELATED 117 647 - -
Mepo4g00881 683 Pfam Protein kinase domain 123 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g00881 683 Gene3D Transferase(Phosphotransferase) domain 1 101 436 - -
Mepo4g00881 683 ProSiteProfiles Protein kinase domain profile. 123 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g00881 683 SMART serkin_6 123 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g00881 683 FunFam casein kinase 1-like protein HD16 96 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00881 Mepo-Chr4 11438206 11444625 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00881 122 278 EF-hand Containing Proteins AT4G35310 31.902 1.10e-08 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Mepo4g00881 Pkinase 4.9e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00881 - - vvi:100254265 1110.9