Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00842 ATGGCTAGGTTCAGCGAAGAAGAAGTTCAATTTTTTGATGCTCAAGATGATATTGTGTCAATCTCAGATGCAAATGGTGTTGCTGACAACCCTGAAGTTGATTCTGGTCCTCCTTTGGTGGAGGGTTTGTTGAGAGATTTTGGATATGAATTGTGGACCAGGAGTCCGGGTAGTGTTAGAGAGCGTAGGAATAAATTTATAAAGTGGATGGAATTGAGTTTGGATCAGAAAAACCTTGAGAATTCGGTAGATGGAAGTAGTTATGAAAGAGAAGATGAGATGAATAGAATGAAAGATGGTGGCAGTAGTGTGACCAAAAGTTATGGTTTTATGGAGGATTTCTTTTCAAGTAGGTTATCGATGTCTTGTTTGTCTTCCATGAATTCTTTAGAATTTGGTGCTTTGGTGGAGAATTCGGCATGCCAAGATAGGAATGATGGAGGGGAAGTAGGTTTGGATCGGTTAGTGGTTTCGGATGAATCTGTGAATGCTGCTGAGGTGTCTTCTACCAGTTACCAACATGAGTTTGGTGAGGAGTTCGAGGGGACAGGTATGTTTGAGTCGTGGACAAAGAGGGTTAAAAAGAGTTGGTTAAGAAAATTGCGTTCAATGACATGCATGATGGATGTACAACAAGATGAATCTGATAACAGGAAGCACGAAGACGGTGTTTCATTCTCTGGTTGTAGGATTCAGCGAGTTAAGGTTCGTCAATGCAAGAAACAAAGAAAGGAACTTTCAGCTCTTTATATGGGACAAGATATTCAAGCGCACGAAGGTCCAATTTTTACCATGAAATTTAGTCCAGATGGCCAGTATCTTGCTAGTGCCGGCGAAGATGGAATTGTGCGATTGTGGCAAGTTGTTGAGGATGAGAGGCATAATGAAATAGACATTCCAGAAGTTGATACATCCTGTATTTACTTTACAGTGAATGATCTCTCGGAATTGACACCCTTGTTTATGGATAAGGATAAAATTACAAATGTGAAGACCCTGAAAAAGACATCAGATTCAGCTTGCATCATTTTTCCTCCTAAGGTCTTCCGGTTGATGGAGAAACCACTTCATGAGTTTCATGGTCATGGAGGTGAAATTTTGGATCTCTCCTGGTCAAAGAATAATTATTTGCTGTCATCGTCGGTTGATAAAACTGTTCGTCTATGGCAAGTGGGACATGACTGCTGCTTGAAAGTTTTCTCACACAGTAACTATGTGACATGCATACAATTCAATCCTGTGGATGATGATTATTTCATTAGTGGATCAATAGATGGAAAAGTGCGCATATGGGCAATTCCGGATTGTCATGTTGTTGATTGGACTGATGTAAAGGAAATTGTCACCGCAGTGTGCTATCGGCCTGATGGACAGGTAGGGATTATTGGCTCCATGACAGGCAATTGTCGGTTTTACAATGTATCAGATAATCAATTACAGATGCAATCACAACTATGCTTACTTGGTAAAAAGAAATCTTCTGGAAGAGGAATAACCGGCTTTCAGTTTCTTCCACAAGATTTTAACAAAGTTATGGTTACCTGTGCTGATTCACAAGTCAGAATCATTGAAGGGCTTAATGTCGTTGAAAAATTCAAAGGCCTTAGTGCAGGGAGCTTAATGTCCGCATCTTTTACTTCAGATGGAAAACACATTTTATCAGCCTGTGAAGACTCAAATGTATATCTGTGGAATGTTAGTGACGACGATTCTCGCTCCACAAAAGCTAAGAAGATTAAGTCCTGCGAGCGGTTTTTTTCAAACGCATCTGTAGCAGTACCTTGGGGTGGTTTGAAATCTGATAACATTGAAAATTCTAAAAAATTGGATGTCCTAAATAAGAGGTCACCTCAAGCTGTATGCCTCGATCCACCGTCTTCTTTTTCTCTAAGCCAAGATTTTTATTTGGATTCTATTCCGAAAGGTTCCGCAACTTATCCCGAGGAGAAACTTCCTACTTCAAGCCCTAAGAGTAAAAAATCTTCACTACACAAATCTGCATACAAGTTCTTGAAATCTTCGTGCAAGAGTACTTCCAATTGTCATGCATGGGGTCTAGTAATCGTGACTGCTGGTTGGGATGGGCGAATAAAATCATTCCACAATTACGGATTACCTCACGTTGTCCTTGGAAAATTGCTGGCTGCTAATGTTCTTCAAGACTCAGAAGCAACGTTTGAATTCGACGGCATCAAAAGGATAACCGAGCAGGCTGCAGTCAAAGGTCAAACCTTAAAATAG 2241 0.4038 MARFSEEEVQFFDAQDDIVSISDANGVADNPEVDSGPPLVEGLLRDFGYELWTRSPGSVRERRNKFIKWMELSLDQKNLENSVDGSSYEREDEMNRMKDGGSSVTKSYGFMEDFFSSRLSMSCLSSMNSLEFGALVENSACQDRNDGGEVGLDRLVVSDESVNAAEVSSTSYQHEFGEEFEGTGMFESWTKRVKKSWLRKLRSMTCMMDVQQDESDNRKHEDGVSFSGCRIQRVKVRQCKKQRKELSALYMGQDIQAHEGPIFTMKFSPDGQYLASAGEDGIVRLWQVVEDERHNEIDIPEVDTSCIYFTVNDLSELTPLFMDKDKITNVKTLKKTSDSACIIFPPKVFRLMEKPLHEFHGHGGEILDLSWSKNNYLLSSSVDKTVRLWQVGHDCCLKVFSHSNYVTCIQFNPVDDDYFISGSIDGKVRIWAIPDCHVVDWTDVKEIVTAVCYRPDGQVGIIGSMTGNCRFYNVSDNQLQMQSQLCLLGKKKSSGRGITGFQFLPQDFNKVMVTCADSQVRIIEGLNVVEKFKGLSAGSLMSASFTSDGKHILSACEDSNVYLWNVSDDDSRSTKAKKIKSCERFFSNASVAVPWGGLKSDNIENSKKLDVLNKRSPQAVCLDPPSSFSLSQDFYLDSIPKGSATYPEEKLPTSSPKSKKSSLHKSAYKFLKSSCKSTSNCHAWGLVIVTAGWDGRIKSFHNYGLPHVVLGKLLAANVLQDSEATFEFDGIKRITEQAAVKGQTLK 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00842 746 PRINTS G protein beta WD-40 repeat signature 419 433 IPR020472 -
Mepo4g00842 746 PRINTS G protein beta WD-40 repeat signature 377 391 IPR020472 -
Mepo4g00842 746 PRINTS G protein beta WD-40 repeat signature 274 288 IPR020472 -
Mepo4g00842 746 ProSiteProfiles Trp-Asp (WD) repeats profile. 399 431 IPR001680 GO:0005515
Mepo4g00842 746 ProSiteProfiles Trp-Asp (WD) repeats profile. 540 574 IPR001680 GO:0005515
Mepo4g00842 746 MobiDBLite consensus disorder prediction 84 99 - -
Mepo4g00842 746 SMART WD40_4 248 287 IPR001680 GO:0005515
Mepo4g00842 746 SMART WD40_4 525 565 IPR001680 GO:0005515
Mepo4g00842 746 SMART WD40_4 434 473 IPR001680 GO:0005515
Mepo4g00842 746 SMART WD40_4 352 390 IPR001680 GO:0005515
Mepo4g00842 746 SMART WD40_4 484 524 IPR001680 GO:0005515
Mepo4g00842 746 SMART WD40_4 393 432 IPR001680 GO:0005515
Mepo4g00842 746 Gene3D - 226 492 IPR015943 GO:0005515
Mepo4g00842 746 MobiDBLite consensus disorder prediction 82 101 - -
Mepo4g00842 746 ProSitePatterns Trp-Asp (WD) repeats signature. 552 566 IPR019775 -
Mepo4g00842 746 Gene3D - 493 703 IPR015943 GO:0005515
Mepo4g00842 746 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 399 431 - -
Mepo4g00842 746 PANTHER WD REPEAT DOMAIN 44 6 706 IPR040324 -
Mepo4g00842 746 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 255 288 - -
Mepo4g00842 746 Pfam WD domain, G-beta repeat 354 389 IPR001680 GO:0005515
Mepo4g00842 746 Pfam WD domain, G-beta repeat 396 431 IPR001680 GO:0005515
Mepo4g00842 746 Pfam WD domain, G-beta repeat 256 286 IPR001680 GO:0005515
Mepo4g00842 746 ProSiteProfiles Trp-Asp (WD) repeats profile. 359 391 IPR001680 GO:0005515
Mepo4g00842 746 ProSiteProfiles Trp-Asp (WD) repeats profile. 255 296 IPR001680 GO:0005515
Mepo4g00842 746 SUPERFAMILY WD40 repeat-like 254 699 IPR036322 GO:0005515
Mepo4g00842 746 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 359 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00842 Mepo-Chr4 11079182 11082347 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00842 351 562 U-box Gene Family AT2G33340 24.670 6.30e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00842 - - cam:101515234 1120.53