Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00821 ATGATAATTAAGAAGAATCTCAAATCTGAAATGCCGAATCGCAAACGGAGAAGATTAACGGAAAACGACGAGTTGACTCAGAGAAAGAAGAAACTTAACGGAAATCATTTTCCGTTAAATCTTCTCAACGGTGCAATTCCCGTTAGTTTTACTGGTTTACTCGGTGCCACCGCAGTTGCGACTGTGGCACCGGGTAATAATGATAATAGCTGCTTTTCCGTTGTCTCTGATGACGACGACGGAAAAGGAGATATTATTAAAACCGCGACGGCTACTGATACGCGGCCGCCGTTGGTTAGAACCTCGCGCGGCCGTCTTCAGGTTATGCCGTCGCGGTTTAATGATTCTGTTATTGTCAATTGGAAGAAAGATGGTAAAAATTCTGCCGCCAATACGACCGCGGCTGCCACGAGCTTTCGTGAATTTGAATTTGAAAAATTTGAAGATTTTAGTCTTAAGAAATGCAATGGGAAGGGGAAGAATGGAACTAGAAACGGAACCGGTGGCGGGCGAGGGTATTCAGAATTGTGTGAGGAGGTGTTGCATAAGAATTTTGGTGTTGCTGCTACTAGTAAGGAAATGAGTTTGCGTGAGATTTTTGAGGAAACAAAGGTGAATAATGGAGTTTTGAAGAAGAAAGAAGGGTTTTTTGGACCAGAGGATTTTGTGGCTGGTGATATAGTTTGGGCTAAGGCTAGGAAAAAGGAACCATTTTGGCCTGCAATTGTGATTGATGCTATGAGTCAAGCACCTGAGCTGGTTTTGAGATCATGTATAGCTGATGCTACTTGTGTCATGTTTCTTGGCTACTCTAGGAATGATGATCACAGGGACTTTGCATGGGTGAAGTATGGGATGATTTTTCCATTTGTGGAAAATGTAGACAGGTTTCAAGAGCAGTCTGAGTTGAGTTACTGTGATCCGTCTCAATTTCAAGCGGCAGTTGAGGAGGCGTTTTTGGCGGATCAGGGGTTTGTAGAGAAGTTAACAGAAGATATAAATGCGGTGGCTGGTAATAATGGTTGCAGTGATGATTCTATTATTAAGAGCGTTCAGAAAGTCACTGCTGCAAACCAGAAGAAGGATATGTTTGACAGAAAGAAAAATGTGGGACTTTGTGACGAATGTGGATTAGACCTTCCTTTCAATATGTCCAAGAAAACAAAGGATTTGACTCCTGGTGGTCAACTCCTATGTAAAACATGTGCTAGGTTGACGAAATCGAAACATTATTGCGGCATATGTAAGAAAGTTTGGAATCAATCGGATAGCGGAAGTTGGGTTCGTTGTGATGGATGTAAAGTGTGGGTGCATGCCGAATGCGACAAAATCTCCAGCATCCTTTTTAAGAATCTTGGAAGCACTGATTATTTCTGCCCTGCTTGCAAAGTGAAGTTTAATTTTGAATTATCTGATTCAGAAAAATCACATCCAAAAATCAAATGGAGCAAATACAATGGGAAGGTAGTGCTTCCAAAGAAGGTCACTGTTCTCTGCAATGGTGTGGAAGGCATATATTTCCCCTGTCTTCATTTAGTTATGTGCAAGTGTGATTTTTGTGGGACCGAAAAACAGGCACTTAGTGAATGGGAACGCCACACAGGTTCCAAAATTAGAAACTGGAAAACAAGTATTCAGGTTAAAGGATCCATGATATCGCTGGAACAATGGATGCTACAGTTGGCTGATTTTCACGCTAAAGTTGTAGTTTCTTCTGTCAAACCTAAAAGACCATCCTCAAAAGAAAGAAAACATAAATTGCTTACCTTTCTGCAAGACAAGTATGAACCTGTTTGTGCTAAGTGGACTACAGAACGATGTGCTGTATGTAGATGGGTTGAAGATTGGGACTACAACAAAATTATCATATGCGTCAGATGTCAAATAGCTGTTCATCAAGAATGCTATGGAGCAAGAAATGTTCGAGACTTTACATCATGGGTTTGTAAAGCTTGTGAAACACCAGACATCACACGAGAGTGTTGTCTTTGTCCTGTAAAAGGTGGTGCTCTAAAGCCTACTGATATTCATCCGTTATGGGTTCATGTCACTTGTGCCTGGTTTCGACCTGAAGTATCTTTTGCCAGTGATGAGAAAATGGAGCCTGCTTTGGGTATCTTAAGTATTCCATCAAATTCTTTCGTGAAGATTTGTGTTATTTGTAAGCAAATCCATGGCTCGTGCACACAATGTGTCAAGTGTTCCACTTACTTCCATGTCATGTGTGCATCAAGGGCCGGTTATCGCATGGAGTTGCATAGTTCGGAAAAAAATGGTAAACAGACAACAAGAATGGTTTGTTACTGTGCTTATCACAGGGCTCCAAATCCAGACACTGTTTTGATTATACAAACCCCTCATGGGGTCATTTCAACTAAAATCCTTATCCAAAATAAGAGAAAAGTTGGGTCAAGATTAATTTCGTCAAACAGAATAAAGGTAGAAGACACTCCTCCAGCAGATAACACCGAACTTGACCCATTTTCTGCTGCTAGGTGCCGAATCTTTGTAAGAACGAACCACACAAAAAAGAGAGCAGCTGATGAAGCCATTCCTCATAAAGTGAGGGGTCACTACCATCATCCTTTAGATGCTATACAGAGATTAAATTCATCCAAAGTGGTAGATGAGTCTCAGACATTTTCATCTTTTAGGGAACGCCTTCATCACTTACAGAGAACCGAAAATGAACGAGTGTGCTTCGGTAGATCGGGCATACATGGATGGGGCCTATTTGCACGAAGAACTATTCAAGAAGGAGAAATGGTCCTTGAATATCGTGGTGAACAAGTAAGGCGCAGTGTTGCCGATCTAAGGGAGGCGCGGTATAAATTAGAAAGGAAAGACTGCTACCTGTTCAAAATTAGTGAAGAGGTGGTAGTTGATGCAACTGATAAAGGAAATATTGCGCGGCTAATTAACCATTCTTGTATGCCAAATTGCTATGCAAGGATCATGAGTGTGGGTCATGACGAGAGCCGGATCGCTCTCATCGCCAAGACTAACGTATCTGCTGGTGATGAGCTAACATATGACTACTTGTTTGATCCTGATGAGCCTGATGAATTCAAAGTCCCTTGCTTATGTAAAGCTCCAAACTGCAGAAAATTCATGAATTAG 3120 0.4151 MIIKKNLKSEMPNRKRRRLTENDELTQRKKKLNGNHFPLNLLNGAIPVSFTGLLGATAVATVAPGNNDNSCFSVVSDDDDGKGDIIKTATATDTRPPLVRTSRGRLQVMPSRFNDSVIVNWKKDGKNSAANTTAAATSFREFEFEKFEDFSLKKCNGKGKNGTRNGTGGGRGYSELCEEVLHKNFGVAATSKEMSLREIFEETKVNNGVLKKKEGFFGPEDFVAGDIVWAKARKKEPFWPAIVIDAMSQAPELVLRSCIADATCVMFLGYSRNDDHRDFAWVKYGMIFPFVENVDRFQEQSELSYCDPSQFQAAVEEAFLADQGFVEKLTEDINAVAGNNGCSDDSIIKSVQKVTAANQKKDMFDRKKNVGLCDECGLDLPFNMSKKTKDLTPGGQLLCKTCARLTKSKHYCGICKKVWNQSDSGSWVRCDGCKVWVHAECDKISSILFKNLGSTDYFCPACKVKFNFELSDSEKSHPKIKWSKYNGKVVLPKKVTVLCNGVEGIYFPCLHLVMCKCDFCGTEKQALSEWERHTGSKIRNWKTSIQVKGSMISLEQWMLQLADFHAKVVVSSVKPKRPSSKERKHKLLTFLQDKYEPVCAKWTTERCAVCRWVEDWDYNKIIICVRCQIAVHQECYGARNVRDFTSWVCKACETPDITRECCLCPVKGGALKPTDIHPLWVHVTCAWFRPEVSFASDEKMEPALGILSIPSNSFVKICVICKQIHGSCTQCVKCSTYFHVMCASRAGYRMELHSSEKNGKQTTRMVCYCAYHRAPNPDTVLIIQTPHGVISTKILIQNKRKVGSRLISSNRIKVEDTPPADNTELDPFSAARCRIFVRTNHTKKRAADEAIPHKVRGHYHHPLDAIQRLNSSKVVDESQTFSSFRERLHHLQRTENERVCFGRSGIHGWGLFARRTIQEGEMVLEYRGEQVRRSVADLREARYKLERKDCYLFKISEEVVVDATDKGNIARLINHSCMPNCYARIMSVGHDESRIALIAKTNVSAGDELTYDYLFDPDEPDEFKVPCLCKAPNCRKFMN 1039
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00821 1039 PANTHER PHD FINGER PROTEINS 94 499 - -
Mepo4g00821 1039 SMART set_7 897 1020 IPR001214 GO:0005515
Mepo4g00821 1039 SUPERFAMILY FYVE/PHD zinc finger 409 467 IPR011011 -
Mepo4g00821 1039 FunFam Histone-lysine N-methyltransferase 871 1039 - -
Mepo4g00821 1039 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 1039 IPR025780 -
Mepo4g00821 1039 CDD PHD_ATX3_4_5_like 606 652 IPR042011 -
Mepo4g00821 1039 ProSiteProfiles SET domain profile. 897 1014 IPR001214 GO:0005515
Mepo4g00821 1039 ProSiteProfiles Post-SET domain profile. 1023 1039 IPR003616 -
Mepo4g00821 1039 Pfam SET domain 908 1013 IPR001214 GO:0005515
Mepo4g00821 1039 MobiDBLite consensus disorder prediction 1 24 - -
Mepo4g00821 1039 SUPERFAMILY SET domain 891 1036 IPR046341 -
Mepo4g00821 1039 SMART PHD_3 717 773 IPR001965 -
Mepo4g00821 1039 SMART PHD_3 411 463 IPR001965 -
Mepo4g00821 1039 SMART PHD_3 606 653 IPR001965 -
Mepo4g00821 1039 Pfam PWWP domain 225 318 IPR000313 -
Mepo4g00821 1039 Pfam PHD-zinc-finger like domain 660 772 - -
Mepo4g00821 1039 CDD ePHD_ATX3_4_5_like 661 772 IPR041955 -
Mepo4g00821 1039 ProSiteProfiles Zinc finger PHD-type profile. 409 465 IPR019787 -
Mepo4g00821 1039 ProSiteProfiles PWWP domain profile. 224 293 IPR000313 -
Mepo4g00821 1039 Gene3D SET domain 864 1039 IPR046341 -
Mepo4g00821 1039 SMART PostSET_3 1023 1039 IPR003616 -
Mepo4g00821 1039 CDD SET_SETD1-like 884 1035 - -
Mepo4g00821 1039 FunFam Histone-lysine N-methyltransferase 656 775 - -
Mepo4g00821 1039 CDD PWWP_AtATX3-like 223 325 - -
Mepo4g00821 1039 Gene3D - 219 324 - -
Mepo4g00821 1039 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 406 466 IPR013083 -
Mepo4g00821 1039 SUPERFAMILY Tudor/PWWP/MBT 216 322 - -
Mepo4g00821 1039 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 656 774 IPR013083 -
Mepo4g00821 1039 ProSiteProfiles Zinc finger PHD-type profile. 604 655 IPR019787 -
Mepo4g00821 1039 SUPERFAMILY FYVE/PHD zinc finger 605 669 IPR011011 -
Mepo4g00821 1039 ProSiteProfiles Extended PHD (ePHD) domain profile. 658 773 IPR034732 -
Mepo4g00821 1039 Pfam PHD-finger 619 653 - -
Mepo4g00821 1039 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 599 655 IPR013083 -
Mepo4g00821 1039 ProSitePatterns Zinc finger PHD-type signature. 607 652 IPR019786 -
Mepo4g00821 1039 CDD PHD_TCF19_like 412 462 - -
Mepo4g00821 1039 Pfam PHD-finger 411 464 IPR019787 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00821 Mepo-Chr4 10724656 10734802 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00821 607 759 C2H2 Transcription Factor Family AT3G14740 34.783 2.88e-19 89.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Mepo4g00821 zf-HC5HC2H_2 1.3e-27 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00821 - - gmx:100811337 1509.58