Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00781 ATGCAAAAGGACAAAGAAGTTGTTAGCAAAGAAAGTAAGGATATGGAAATGGAAGGAAATCGTGAGAAAGAGGAAACCCTACCTCCCGGTTTTCGATTTCATCCTACGGATGAAGAGCTCATCACTTACTATCTTGTAAACAAGATTTCAGATTCTATAAATTTTACATGCAAAGCAATAGGTGATGTAGATCTCAACAAATGCGAGCCATGGGAGCTTCCAGGGAAGGCCAAGATGGGTACAAAAGAATGGTACTTTTTCAGTCTAAGAGATCGTAAATATCCAACAGGTGTGAGAACTAATAGAGCAACAAACACTGGATATTGGAAAACCACAGGGAAAGACAAGGAGATTTTCAACAGTGTTACATCAGAATTGGTTGGTATGAAGAAGACTTTGGTTTTTTACAAAGGTCGGGCTCCTAGAGGAGAGAAAACCAACTGGGTTATGCATGAATACCGTATTCATTCCAAATCTAGCATCAGAACCAACAAGCAGGATGAATGGGTGGTAAGCAGAGTATTCCGCAAGAGTGCAGGTGCAAAGAAGTATCCTTCTTCTTCAAATCTTACAAGAGCAGTCATGAATCCTTACAATATTAATCTAGAAGTTGGTCCTCCTAGCTTTAATAATAATATGCCACCACCAACAATGATGCAGCATTTAGGGCTAGATTCTGCTACTCATTTCCAGCTCTATGGAAGGAACTACCTCAACACTGGAGAAGTTCTAAGAGCTGGTGTACCAATGCATCAATATTCCCATTTATCATCATCATCCTTAGGAGGAGAAGGATTCACCATTTCAGGGCTTAATTTGAATCTTGGAGGATCTACATCATCACAAACTATTTTGAGGCCACTGCCATCAACTACTCATACTATGGCTGCTGATTTCAGCTCCAACATGATGACAGGTGCAAATAGTAATACCCTTGTTCCTGCAGAGAATAATAATAACTTAGGGTATGATGGTGGAGATCAAGTGAATAATGCAAACCCTACTCATGGCAATAGGTACAATATGCAGAGTACTATGGACCATTGTGTGGATCTTGATCATTACTGGCCACCTTCTTACTGA 1083 0.4007 MQKDKEVVSKESKDMEMEGNREKEETLPPGFRFHPTDEELITYYLVNKISDSINFTCKAIGDVDLNKCEPWELPGKAKMGTKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSVTSELVGMKKTLVFYKGRAPRGEKTNWVMHEYRIHSKSSIRTNKQDEWVVSRVFRKSAGAKKYPSSSNLTRAVMNPYNINLEVGPPSFNNNMPPPTMMQHLGLDSATHFQLYGRNYLNTGEVLRAGVPMHQYSHLSSSSLGGEGFTISGLNLNLGGSTSSQTILRPLPSTTHTMAADFSSNMMTGANSNTLVPAENNNNLGYDGGDQVNNANPTHGNRYNMQSTMDHCVDLDHYWPPSY 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00781 360 MobiDBLite consensus disorder prediction 1 31 - -
Mepo4g00781 360 SUPERFAMILY NAC domain 24 177 IPR036093 GO:0003677|GO:0006355
Mepo4g00781 360 FunFam NAC domain-containing protein 100-like 36 181 - -
Mepo4g00781 360 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 24 289 - -
Mepo4g00781 360 Gene3D NAC domain 36 181 IPR036093 GO:0003677|GO:0006355
Mepo4g00781 360 ProSiteProfiles NAC domain profile. 27 177 IPR003441 GO:0003677|GO:0006355
Mepo4g00781 360 Pfam No apical meristem (NAM) protein 28 155 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00781 Mepo-Chr4 10296500 10300422 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00781 18 357 NAC Transcription Factor Family AT2G24430 50.559 7.26e-106 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mepo4g00781 NAM 3.7e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00781 - - gmx:100811175 454.136