Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00779 ATGCCTCGTGGGACGCTTGAAGTTGTTCTCATTGGAGCAAAAGACCTTCATGACAGTGATTTGTTCAAGAAAATGGATCCCTATGTGATCCTCTCCTATCGATCTCAAGAGCACAAAAGCAGTGTAGCCAAAAATGCAGGATCTAATCCCCGTTGGAATGAAAGCTTCCTTTTCACAGTTTCTGACAATGTTGCTGAGCTTAATTTGAGGCTAATGGATGAAGACACATTTACCAAGGATGACTACCTTGGTGAAGTGAAAATTCATTTGGGACCAGTTCTTGAGTATGGGAGCATACCAGAAACTGCTTATAATGTTGTGAAGCAGCAGAATTATTGTGGAGAGGTTCATGTGGCTCTCACTTTTCATCCTGAGGGTGGGCGGTACTGA 390 0.4308 MPRGTLEVVLIGAKDLHDSDLFKKMDPYVILSYRSQEHKSSVAKNAGSNPRWNESFLFTVSDNVAELNLRLMDEDTFTKDDYLGEVKIHLGPVLEYGSIPETAYNVVKQQNYCGEVHVALTFHPEGGRY 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00779 129 SMART C2_3c 5 102 IPR000008 -
Mepo4g00779 129 Pfam C2 domain 4 98 IPR000008 -
Mepo4g00779 129 Gene3D C2 domain 2 125 IPR035892 -
Mepo4g00779 129 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Mepo4g00779 129 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1 126 IPR035892 -
Mepo4g00779 129 PANTHER C2 DOMAIN-CONTAINING 1 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00779 Mepo-Chr4 10244576 10247019 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00779 4 94 C2H2 Transcription Factor Family AT4G21160 34.066 4.92e-13 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00779 - - gmx:100814819 199.904