Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g00778 ATGGAACATGACAAAGATTTGAATCGGGCATCAAGTTCTTCAGAACATGAAAGCAATTCCGTTCTTGGAACTCAAAGGCCTGCCTCTATTCAACAACGTAGACAAAAGAGCACTGCCTTTCTAGTTTTGCATTATCTTGTTGCTCACATTGTCCTTGTTATCATGACTAATAGAAGGGTGACTGGCCCTACAAGAAGATCAACTAAAGGAGGCTGGACAGAGAAGGAGGATAAACTTTTGATTGCTGCTGTGAAAAAGTATAATGGAAAAAGTTGGAAAAAGATAGCTGCATGTGTTACTGGCAGAACAGATGTTCAATGTTTGCATCGTTGGCAAAAGGTTCTGAATCCTGATCTTATCAAAGGACCTTGGTCAGAACAGGAAGATAATCAACTGAGTGAGCTTGTTAAGATAAATGGGAAAAAAAATTGGTCTCAGGTAGCAAAGTCCTTACCAGGTCGCATAGGTAAACAATGTAGAGAAAGGTGGTATAACCATTTAAATCCAGATATAAAAAAAACTCCATGGACCAAAGAAGAGGAGTCAACTCTTATCAAGACTCACAAAATATATGGAAATAGTTGGGCTGAAATAGCCAAATTTCTGCATGGAAGGAGTGAAAACTCTATCAAGAACCATTGGAATTGCTCTTTGAAGAAAAAGGTTGATTTAAATACCTCAGTGGACACCTCCAGAACTGATTATGATACAGCTACCCCAATTGAAACAAGCATTGATACAAATGTTGAAACTCCTCAAAGCATAGACAATGCAAGCCATGACTTTTTGGCAACACCCAAGAACACTAACATCCATGCACAAAATAATTCAATTTTTAATTCCCTTTGTAATAACCCATCAAATTCCACAGAAGAAACACTTGATACTAGTAGTCCAAGCCTAAGAGACATATTAAGTGCTTTAAAGACTTCTGCTAGGAAATGTAAATACATTCCATCTATCCTTAGACGCAAGTAG 978 0.3773 MEHDKDLNRASSSSEHESNSVLGTQRPASIQQRRQKSTAFLVLHYLVAHIVLVIMTNRRVTGPTRRSTKGGWTEKEDKLLIAAVKKYNGKSWKKIAACVTGRTDVQCLHRWQKVLNPDLIKGPWSEQEDNQLSELVKINGKKNWSQVAKSLPGRIGKQCRERWYNHLNPDIKKTPWTKEEESTLIKTHKIYGNSWAEIAKFLHGRSENSIKNHWNCSLKKKVDLNTSVDTSRTDYDTATPIETSIDTNVETPQSIDNASHDFLATPKNTNIHAQNNSIFNSLCNNPSNSTEETLDTSSPSLRDILSALKTSARKCKYIPSILRRK 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g00778 325 CDD SANT 123 167 IPR001005 -
Mepo4g00778 325 FunFam Transcriptional activator Myb isoform A 121 172 - -
Mepo4g00778 325 ProSiteProfiles Myb-like domain profile. 168 218 IPR001005 -
Mepo4g00778 325 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 172 222 IPR017930 -
Mepo4g00778 325 SMART sant 120 169 IPR001005 -
Mepo4g00778 325 SMART sant 172 220 IPR001005 -
Mepo4g00778 325 SMART sant 68 117 IPR001005 -
Mepo4g00778 325 CDD SANT 72 115 IPR001005 -
Mepo4g00778 325 Gene3D - 120 172 - -
Mepo4g00778 325 ProSiteProfiles Myb-like domain profile. 116 167 IPR001005 -
Mepo4g00778 325 SUPERFAMILY Homeodomain-like 67 129 IPR009057 -
Mepo4g00778 325 SUPERFAMILY Homeodomain-like 118 214 IPR009057 -
Mepo4g00778 325 Gene3D - 174 222 - -
Mepo4g00778 325 ProSiteProfiles Myb-like domain profile. 64 115 IPR001005 -
Mepo4g00778 325 CDD SANT 175 215 IPR001005 -
Mepo4g00778 325 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 116 171 IPR017930 -
Mepo4g00778 325 Pfam Myb-like DNA-binding domain 69 115 IPR001005 -
Mepo4g00778 325 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 115 IPR017930 -
Mepo4g00778 325 MobiDBLite consensus disorder prediction 13 30 - -
Mepo4g00778 325 FunFam Transcriptional activator Myb isoform A 68 120 - -
Mepo4g00778 325 Gene3D - 68 118 - -
Mepo4g00778 325 PANTHER MYB PROTEIN-RELATED 69 142 - -
Mepo4g00778 325 MobiDBLite consensus disorder prediction 1 30 - -
Mepo4g00778 325 Pfam Myb-like DNA-binding domain 124 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g00778 Mepo-Chr4 10236057 10239771 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g00778 54 224 MYB Transcription Factor Family AT5G02320 63.743 1.02e-77 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo4g00778 Myb_DNA-bind_6 5.4e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g00778 - - cam:101493427 330.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g00778 4 10236057 10239771 Mepo4g00778 4 10236057 10239771 ECH